unit 3 Flashcards

1
Q

what are the types of microscope?

A

light, fluorescent, and electron

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

how does bright field microscopy work?

A

light rays emitted, condenser focuses rays onto a sample, light that is absorbed produces contrast, objective lens captures the rays

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

what is the product of bright field?

A

magnified version of sample

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

what is the limit of resolution?

A

the extent to which a microscope can distinguish fine details in the specimen as separate, distinct points

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

why is phase contrast used?

A

enables us to visualize unstained, live cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

how does phase contrast work?

A

shows difference in refractive index parts of cells as different areas of brightness and darkness
due to phase plate being between illumination source and condenser lens

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

why is dark field microscopy used?

A

to visualize small structures

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

how does dark field microscopy work?

A

an opaque disc is placed on the center of the condenser so light only passes around its edges which results in light scattering

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

what are the types of electron microscopes?

A

transmission (specimen must be thin) and scanning (3D)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

what is the function of electron microscopy?

A

to increase the resolving power of the microscope

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

what is the purpose of atomic force microscopy?

A

to study surface topography at molecular and atomic resolution

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

what is immune staining?

A

the process of identifying proteins in tissue sections, incubating with antibodies specific to protein of interest, then visualizing the bound antibody using a chromogen

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

what are the steps for preparing tissues for microscopy?

A

fixation (usually with aldehydes)
dehydration (alcohol)
clearing (xylene)
embedding (paraffin)
sectioning
staining

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

what is the function of the cell membrane?

A

boundary and permeability barrier
organization and localization of function
transport process
signal detection
cell-to-cell communication

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

what is the fluid mosaic model?

A

describes the structure of the plasma membrane as a mosaic of components
has a phospholipid bilayer, with hydrophilic heads pointed out and hydrophobic tails away from the aqueous surface

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

are phospholipids amphipathic?

A

yes (hydrophobic and hydrophilic)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
17
Q

what regulates the rigidity of the membrane?

A

cholesterol

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
18
Q

what does the outer leaflet of the lipid bilayer consist of?

A

phosphatidyl choline, sphingomyelin, and glycolipids

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
19
Q

what does the inner leaflet of the lipid bilayer consist of?

A

aminophospholipids (phosphatidyl serine, ethanolamine, inositol)

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
20
Q

what contributes a negative charge in the inner membrane?

A

phosphatidyl serine

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
21
Q

what does protein kinase C bind to? when?

A

PKC binds to negatively charged phosphatidyl serine on the inner membrane when active

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
22
Q

what is essential for PKC function?

A

negatively charged environment

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
23
Q

what is phosphoinositol involved in?

A

signal transduction

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
24
Q

what are the functions of membrane carbohydrates?

A

protection, lubrication, cell to cell recognition, adhesion

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
25
Q

what is glycocalyx?

A

carbohydrate coat on the cell surface

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
26
Q

what are some specializations of the plasma membrane?

A

microvilli, stereocilia

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
27
Q

what are the two primary mechanisms for molecular transport across the membrane?

A

passive and active

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
28
Q

what is endocytosis?

A

a process by which extracellular materials are captured and enclosed within membrane bound carriers that invaginate and pinch off cytoplasm from membrane

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
29
Q

what is exocytosis?

A

process where intracellular molecules like hormones, antibodies etc contained within a membrane-bound vesicle discharged outside of a cell by fusion of vesicle with plasma membrane of a cell

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
30
Q

endocytosis

A
How well did you know this?
1
Not at all
2
3
4
5
Perfectly
31
Q

what coated proteins are involved in endocytosis/exocytosis?

A

clathrin and caveolin

32
Q

exocytosis

A
33
Q

what are caveoli?

A

invaginations braced by the protein calveolin

34
Q

what is potocytosis?

A

surface caveoli concentrate substances from the extracellular space and transport them into the cell

35
Q

what is transcytosis?

A

caveoli are used to transport materials from the extracellular space on one side to extracellular space on the other side

36
Q

general features of the nucleus

A

site within eukaryotic cell where chromosomes are localized and replicated
where DNA is selectively transcribed

37
Q

what does the eukaryocyte do?

A

compartmentalizes activities of the cell’s genome, both replication and transcription, from the rest of the cellular metabolism

38
Q

what does the nuclear envelope consist of?

A

inner and outer nuclear membrane, perinuclear space

39
Q

how is the inner nuclear membrane supported?

A

by a rigid network of protein filaments attached to its inner surface called nuclear lamina
also contains specific laminate receipts that bind to chromosomes and secure attachment of the nuclear lamina

40
Q

what is the perinuclear space filled with? what do its contents do?

A

filled with fluid, continuous with ER
protects and regulates the function of the genome

41
Q

how is the nuclear pore formed? what is if lined with?

A

formed by the fusion of the two membranes of the nuclear envelope
lined with nuclear pore complex

42
Q

what does the nuclear pore complex provide?

A

direct contact between the cytosol and nucleoplasm

43
Q

what is the nuclear lamina?

A

a thin electron-dense protein layer which acts as a nucleoskeleton

44
Q

what does the nuclear lamina do?

A

serves as a scaffolding for chromatin, chromatin-associated proteins, nuclear pore complex, and membrane of nuclear envelope

45
Q

what are the two types of chromatin?

A

heterochromatin, euchromatin

46
Q

what does each nucleosome consist of?

A

a histone octamer core and ~2 turns of DNA wound around it

47
Q

what does the histone octamer contain?

A

2 H2A, 2 H2B, 2 H3, 2 H4 histones

48
Q

where are nucleolus present?

A

eukaryotic nucleus

49
Q

what is the nucleolus the site of?

A

ribosomal RNA synthesis and initial ribosomal assembly

50
Q

what are the three distinct regions of the nucleolus?

A

fibrillar centers, fibrillar component, and granular component

51
Q

what do fibrillar centers contain?

A

contain DNA loops of 5 different chromosomes that contain rRNA genes together with significant amounts of RNA polymerase I and transcription factor

52
Q

what do fibrillar components contain?

A

ribosomal genes that are actively undergoing transcription accumulating large amounts of ribosomal RNA

53
Q

what do granular centers represent?

A

the site of initial ribosomal assembly which contains densely packed pre ribosomal particles

54
Q

how many membranes do mitochondria have?

A

2, inner and outer

55
Q

what do the two mitochondrial membranes create?

A

the matrix and a narrow intermembrane space

56
Q

what is the inner membrane of the mitochondria a location of?

A

electron transport protein complexes and ATP synthesis

57
Q

what are the infoldings of the inner mitochondrial membrane called?

A

cristae, increase SA

58
Q

what kind of DNA is found in the mitochondria?

A

double-stranded circular

59
Q

the rough ER mainly synthesizes what?

A

protein

60
Q

what will proteins synthesized in rER require?

A

sorting signals called signal sequences

61
Q

the smooth ER mainly synthesizes what?

A

fatty acids and phospholipids

62
Q

sER in liver

A

helps detoxify hydrophobic compounds like pesticides and carcinogens by chemically converting them into water-soluble products to be eliminated from the body

63
Q

what does the sarcoplasmic reticulum do?

A

sequesters Ca++ that is essential for the contractile process
found in skeletal and cardiac muscle

64
Q

what are polyribosomes? what do they do?

A

several ribosomes together, attach to a thread of mRNA

65
Q

what is the Golgi complex the site of?

A

processing and packing ER products
glycosylation of proteins produced in the ER and their packaging
(located near nucleus, prominent in secretory cells)

66
Q

primary lysosome

A

contains one or many enzymes

67
Q

secondary lysosome

A

fusion with one or more primary lysosomes with phagocytized material

68
Q

residual body lysosome

A

incomplete digestion by the lysosome (high numbers of residual bodies in Tay-Sachs)

69
Q

why do nuclei stain dark in H&E stains?

A

nuclei are acidic in nature, so they bind with the basic hematoxylin

70
Q

paneth cells vs RBCs

A

paneth cells contain acidic granules and therefore appear more granular

71
Q

PAS staining

A

used to identify carbohydrates, carbs are stained bright pink

72
Q

Feulgen staining

A

stains DNA magenta, specific for deoxyribose sugar

73
Q

trichrome stain

A

nuclei - dark purple
cytoplasm - bright red
connective tisse - blue

74
Q

immunohistochemistry

A

localizes specific antigens by exploiting the specific binding relationship between antibody and antigen in a tissue section

75
Q

immunocytochemistry

A

localizes a specific antigen by way of specific antibody/antigen binding in a single layer of cells

76
Q

what are the kinds of light microscope?

A

bright field, phase contrast, dark field

77
Q

what is Zellweger syndrome?

A

a lethal condition caused by the defective assembly of peroxisomes due to the lack of transport of enzyme proteins into the peroxisome