Topic 9 (Electronegativity) Flashcards

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1
Q

Atoms with a high electronegativity have

A

A higher affinity for electrons

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2
Q

Oxygen is always trying to

A

Steal electrons

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3
Q

What is a polar covalent bond?

A

Electrons are shared unevenly (ex: H2O)

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4
Q

What is a non-polar covalent bond?

A

Electrons are shared evenly

ex: O2, H2, CH4

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5
Q

What type of molecule is water and what bonds does it form?

A

Water is a polar molecule. It forms hydrogen bonds

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6
Q

What is bond energy?

A

The amount of energy required to break a bond

The amount of energy that is released when a bond is formed

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7
Q

What bonds have a higher bond energy? Polar covalent or non-polar covalent bonds

A

Polar covalent bonds

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8
Q

What has the highest bond energy and the lowest?

A

Lowest: C-O
Highest: C=O

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9
Q

Define metabolism

A

The set of chemical reactions that occur in cells to maintain life

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10
Q

What is a catabolic reaction?

A

It is when energy is released from breaking down complex molecules into simpler compounds

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11
Q

Define anabolic reaction?

A

Consume energy to build complex molecules from simpler ones

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12
Q

What is the energy currency of the cell?

A

ATP (Adenosine Triphosphate)

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13
Q

ATP –> ADP

A

When ATP (high energy) is broken down into ADP (low energy), energy is released

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14
Q

ATP

A

When ADP + Pi are combined to make ATP, energy is stored

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15
Q

How do enzymes speed up metabolic reactions?

A

They lower energy barriers

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16
Q

What is energy activation?

A

In living cells, the energy needed to start a reaction (to break bonds for instance) is lowered by enzymes

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17
Q

What is the enzyme responsible for degrading peptidoglycan

A

Lysozyme

18
Q

What is the enzyme for penicillin?

A

Penicillinase

19
Q

What does DNAse do?

A

‘Digests’ DNA

20
Q

What does Proteinase do?

A

Digests protein (aka protease)

21
Q

What does ATP synthase do?

A

Synthesizes ATP

22
Q

What does Reverse Transcriptase do?

A

Used by HIV virus to transcribe its RNA genome to DNA

23
Q

What does Integrase do?

A

Enzyme used by HIV to integrate its genome into host cell’s genome

24
Q

What is a substrate?

A

The reagent to which the enzyme binds (the starting material)

25
Q

How would you express an enzyme controlled reaction

A

Substrate(s) —- Enzyme –> Product(s)

26
Q

What do enzymes do to reactions?

A

Catalyze them

27
Q

How do enzymes speed up reactions? (2)

A
  • Align the reagent(s) properly

- Lower the amount of energy needed for reactions to occur

28
Q

What happens at the active site?

A

It is where the action is. At the active site cleft that binds single strand of DNA and makes the double strand

29
Q

What is dehydration synthesis?

A

Stealing water builds a more complex molecule (and requires energy)

30
Q

What is usually added/removed when enzymes build or disassembling molecules?

A

Water

31
Q

Define hydrolysis

A

Adding water breaks the molecule and there is a net release of energy (more energy is released by the formation of H2O)

32
Q

Enzymes can.. (3)

A
  • Build Molecules
  • Break them down
  • Transfer things
33
Q

What needs to be specific for an enzyme to function (7)

A
  • Temperature
  • pH
  • Substrate concentrations
    ALSO: salt concentrations, product concentrations, different organs, cell compartments
34
Q

Name 3 ways proteins can be denatured

A

Changes in: heat, pH, or chemicals

35
Q

What is competitive binding?

A

Bind at the same location as substrate

36
Q

What is non-competitive binding?

A

Bind somewhere else and disrupt active site or bar entry into active site (allosteric regulation) *see slide 32 for pic

37
Q

How do inhibitors bind?

A

Reversibly or irreversibly

38
Q

What is an example of an inhbitor?

A

Sarin: binds covalently to serine

39
Q

What does the inhibitor ASA do?

A

It binds reversibly to an enzyme that forms prostanoids responsible for swelling and pain

40
Q

What does the inhibitor Pen G do?

A

Binds covalently (irreversibly) to enzymes involved in bacterial cell wall biosynthesis

  • Lethal to the bacteria
  • Does not affect our cells (no cell walls)
41
Q

The Citric Acid Cycle (AKA the Kreb’s Cycle) details

A
  • Pyruvate broken down to CO2
  • 2 ATP
  • 8 to 10 electrons passed to carriers
42
Q

In the Citric Acid you get… (end products)

A
6 NADH + H+ 
2 FADH2 
4 CO2 
2 ATP 
Regenerate oxaloacetate for next "turn of the wheel"