Topic 2: Enzyme theory Flashcards

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1
Q

Enzymes speed up _________ __________.

Without enzymes the reactions in the body (or other organisms) would take place too slowly at _____ __________ to keep us alive.

A

chemical reactions

body temperature

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2
Q

Key Summary: List the 5 properties of an enzyme

A
  1. A GLOBULAR PROTEIN, so has tertiary structure
  2. A BIOLOGICAL CATALYST – {speeds up the rate of a chemical reaction/reduces activation energy/not used up in the reaction/made by cells}
  3. Show SPECIFICITY for a particular substrate due to the SPECIFIC SHAPE OF THEIR ACTIVE SITE WHICH FITS THE COMPLEMENTARY SHAPE OF THE SUBSTRATE
  4. Works at a SPECIFIC TEMPERATURE AND pH level
  5. SOLUBLE IN WATER - due to hydrophilic amino acid R groups on the outside
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3
Q

Key Summary: Define Biological catalyst

4 points

A
  1. Molecule produced by {organisms/cells}
  2. that speeds up the rate of reactions
  3. by reducing the activation energy.
  4. It is not used up or destroyed in the reaction.
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4
Q

Key Summary:
Define Activation energy (1 point)

Activation energy is reduced by ________
by… (1 point)

A
  1. Energy needed for a reaction to occur

enzymes

  1. By causing bonds to BREAK, WEAKEN, or FORM.
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5
Q

Enzymes ______ the ACTIVATION energy for a reaction, allowing the reaction to take place.

A

reduce

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6
Q

How does an enzyme lower the activation energy in a JOINING reaction?
(2 points)

A
  1. the active site will hold the substrate molecules together overcoming any repulsion or allowing specific electrically charged groups in the substrates to interact
  2. so bonds can form more easily
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7
Q

How does an enzyme lower the activation energy in a BREAKING reaction?
(2 points)

A
  1. the way the substrate fits into the active site may put strain on some bonds
  2. so substrate distorted and bonds can be broken more easily
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8
Q

______ _____ can have acidic amino acids which provide an ________ environment or basic amino acids which form an ________ environment – each of these may be favourable for a specific _______.

A

Active sites

acidic

alkaline

reaction

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9
Q

Key Summary: Describe the 3D structure of an enzyme

4 points

A
  1. It is a GLOBULAR PROTEIN (in a question, can then describe the molecular structure of a globular protein)
  2. Bonds eg. ionic, disulphide, hydrogen, between R groups
  3. Hydrophobic and hydrophilic interactions – hydrophilic amino acids on the outside, hydrophobic inside
  4. Has an ACTIVE SITE with a SPECIFIC SHAPE to fit the substrate
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10
Q

Enzymes are large molecules made up of hundreds of ______ ______.

Most of the _______ ______ maintain the ______ structure of the enzyme (bonds form between _ groups). The specific 3D shape allows the enzyme to work, as it makes sure the active site is the right shape – _____________ to the shape of the substrate.

A

amino acids

amino acids

tertiary

R

complementary

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11
Q

Define active site

2 points

A
  1. the region where the SUBSTRATE BINDS which has a COMPLEMENTARY SHAPE to the substrate,
  2. and where the reaction takes place
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12
Q

Usually less than __ amino acids form the active site.

A

10

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13
Q

Enzymes are involved in ________ _______ which change one substance into another.

A

chemical reactions

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14
Q

Name the 2 theories of how the enzyme and substrate bind

A
  1. The lock and key theory

2. The induced fit theory

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15
Q

Explain the lock and key theory

3 points

A
  1. the substrate fits into the active site of the enzyme,
  2. they bind together and form the enzyme substrate complex.
  3. The shape of the enzyme fits the shape of the substrate EXACTLY (like a lock and key)
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16
Q

Explain the induced fit theory

1 point

A
  1. The enzyme CHANGES SHAPE SLIGHTLY when the substrate binds
17
Q

Give 1 SIMILARITY between the lock and key theory and the induced fit theory
(1 SIMILARITY)

A

SIMILARITY:

1. Substrate fits into the active site and binds to it – they have complementary shapes.

18
Q

Give 1 DIFFERENCE between the lock and key theory and the induced fit theory
(1 DIFFERENCE)

A

DIFFERENCE:
1. In lock and key theory, the shape of the substrate fits the shape of the active site exactly, but in the induced fit theory the enzyme changes shape slightly when the substrate binds.

19
Q

Key Summary: how do enzymes work? (mechanism of action)

7 steps

A
  1. Substrate fits into and BINDS TO enzyme active site
  2. SHAPE of active site fits the SHAPE of the substrate – {lock and key/induced fit}
  3. Enzyme-substrate complex forms
  4. Lowers the activation energy for the reaction
  5. The substrate is held in the correct position for bonds to be broken or formed, and product to be made
  6. Product is released from active site as it is the wrong shape to fit
  7. Enzyme is unchanged and free to accept more substrate
20
Q

Because the shape of the substrate fits the shape of the active site, enzymes are said to be ‘_______’ for one particular {substrate/reaction}.

A

specific

21
Q

Key Summary: Explain enzyme specificity or why an enzyme {only has one substrate/catalyses one reaction}
(5 steps)

A
  1. An {enzyme/named enzyme from question} has a {specific tertiary structure/specific substrate}
  2. due to the SPECIFIC SHAPE of active site.
  3. Only {substrate/named molecule from question} will fit into the active site (Lock and key theory. Enzyme is the lock, substrate is the key)
  4. to form an ENZYME-SUBSTRATE COMPLEX.
  5. Another substrate ha a different shape.
22
Q

____________ enzymes catalyse reactions INSIDE cells.

A

Intercellular

23
Q

____________ enzymes catalyse reactions OUTSIDE of cells.

A

Extracellular

24
Q

Intracellular enzymes and extracellular enzymes are made in ____, on ________, as they are ________.

A

cells

ribosomes

proteins

25
Q

Extracellular enzymes usually leave cells by ___________.

A

exocytosis

26
Q

Give 5 examples of intracellular enzymes

A
  1. ATP synthase
  2. RuBISCO
  3. DNA helicase
  4. DNA polymerase
  5. RNA polymerase

(found in cells)

27
Q

Give 5 examples of extracellular enzymes

A
  1. Amylase
  2. Lipase
  3. Proteases (e.g. pepsin)
  4. Thromboplastin
  5. Thrombin

(enzymes usually found in body fluids)