Steve Irwin's Immunology Intellegence Flashcards
Lymph nodes are
secondary lymphoid organs that have many afferents, 1 or more efferents. Encapsulated, with trabeculae. Functions are nonspecific filtration by macrophages, storage of B and T cells, and immune response activation. Functions are nonspecific filtration by macrophages, storage of B and T cells and immune response activation.
Follicle of a lymph node
Site of B cell localization and proliferation. In outer cortex. primary follicles are dense and dormant. secondary follicles have pale central germinal centers and are active
Medulla of lymph node
Consists of medullary cords (closely pack lymphocytes and plasma cells) and medullary sinuses. Medullary sinuses communicate with efferent lymphatics and contain reticular cells and macrophages.
Paracortex of lymph node
Houses T cells. Region of cortex between follicles and medulla. Contains high endothelial venules through which T and B cells enter from blood. Not well developed in patients with DiGeorge syndrome.
Cervical Lymph nodes drain what area of the body
Head and Neck
Hilar Lymph nodes drain what area of the body
Lungs
Mediastinal Lymph nodes drain what area of the body
Trachea and esophagus
Axillary Lymph nodes drain what area of the body
Upper limb, breast, skin above umbilicus
Celiac Lymph nodes drain what area of the body
Liver stomach spleen pancreas and upper duodenum
Superior mesenteric Lymph nodes drain what area of the body
Lower duodenum, jejunum, ileum, colon to splenic flexure
Inferior Mesenteric Lymph nodes drain what area of the body
Lower rectum to anal canal above the pectinate line, bladder, vagina (middle third), prostate
Para-aortic Lymph nodes drain what area of the body
Tests, ovaries, kidneys, uterus
Superficial inguinal Lymph nodes drain what area of the body
Anal canal (below pectinate line), skin below umbilicus (except popliteal territory)
Popliteal Lymph nodes drain what area of the body
Dorsolateral foot posterior calf
Right lymphatic duct drains what are
drains right side of body above diaphragm
Sinusoids of spleen
long, vascular channels in red pulp with fenestrated barrel hoop basement membrane. Macrophages found nearby
Where are T and B cells found in spleen
T cells: found in periarterial lymphatic sheath within the white pulp
B cells: found in follicles within the white pulp of the spleen.
What happens in the marginal zone of spleen
In between the red and white pulp: contains APCs and specialized B cells, where APCs present blood-borne antigens
Macrophages in the spleen do what?
Remove encapsulated spleen
Splenic dysfunction will lead to what
Decreased IgM leading to decreased complement causing decreased C3b opsonization and increased susceptibility to encapsulated organisms
Leads to infections form SHiNE SKiS:
Strep pneumoniae, H Influenza, Neisseria meningitidis, E coli, Salmonella, Klebsiella pneumoniae, group b Strep.
Thymus function:
Site of T cell differentiation and maturation. Encapsulated. from epithelium of 3rd pharyngeal pouch. Lymphocytes of mesenchymal origin. Cortex is dense with immature T cells; medulla is pale with mature T cells and Hassal corpuscles containing epithelial reticular cells.
Components of innate immunity
Neutrophils, macrophages, monocytes, dendritic cells, NK cells (lymphoid origin), complement
Components of adaptive immunity
T cells, B cells, circulating antibodies
What are the secreted proteins of innate immunity
lysozyme, complement, CRP, defensins
How does innate immune system recognize pathogen
Toll like receptors: pathogen recognition receptors that recognize pathogen-associated molecular patterns (PAMPs). Examples of PAMPs are LPS, flagellin, ssRNA
Gene loci of MHC I
HLA-A, HLA-B, HLA-C
Gene loci of MHC II
HLA-DR, HLA-DP, HLA-DQ
MHC I: binds
TCR and CD8
MHC II: binds
TCR and CD4
Function of MHC I
Present endogenously synthesized antigens (e.g. viral) to CD8+ cytotoxic T cells
Function of MHC II
Present exogenously synthesized proteins (e.g. bacterial proteins, viral capsid proteins) to T-Helper Cells
How is antigen loaded in MHC I
antigen peptides loaded onto MHC I in RER after delivery via TAP peptide transporter
How is antigen loaded in MHC II
Antigen loaded following release of invariant chain in an acidified endosome
HLA subtypes associated with: Hemochromatosis
A3
Diseases associated with B27 HLA
Psoriatic arthritis, Ankylosing spondylitis, arthritis of Inflammatory bowel disease, Reactive arthritis (PAIR)
This group of disorders is called seronegative arthropathies
HLA subtypes associated with: Celiac disease
DQ2/DQ8
Diseases associated with HLA DR2
Multiple sclerosis, hay fever, SLE, Goodpasture syndrome
Diseases associated with HLA DR3
Daibetes mellitus type 1, SLE, Graves disease
Diseases associated with HLA DR4
Rheumatoid arthritis, diabetes mellitus type 1
“there are 4 walls in a rheum”
Diseases associated with HLA DR5
pernicious anemia causing vitamin B12 deficiency, Hashimoto thyroiditis
Natural killer cells
Uses perforin and granzymes to induce apoptosis of virally infected cells and tumor cells. Only lymphocyte member of innate immune system.
Actively enhanced by IL-2, IL-12, IFN-beta, and IFN-alpha
induced to kill when exposed to a nonspecific activation signal on target cell and/or to an absence of MHC 1 on target cell surface.
Also kills via antibody-dependent cell-mediated cytotoxicity (CD16 binds Fc region of bound Ig, activating the NK cell).
Major functions of B cells
Recognize antigen-undergo somatic hypermutation to optimize antigen specificity. Produce antibody-differentiate into plasma cells to secrete specific immunoglobulins.
Maintain immunologic memory-memory b cells persist and accelerate future response to antigen
major functions of T cells
CD4+: help B cells make antibody and produce cytokines to activate other cells of immune system
CD8+: T cells kill virus infected cells directly. Delayed cell-mediated hypersensitivity (Type IV)
Acute and chronic cellular rejection
Rule of 8 “MHC 2 x CD4=8 and MHC 1 x 8=8”
Differentiation of T cells: Positive selection
happens in thymic cortex, T cells expressing TCRs capable of binding surface self MHC molecules survive
Differentiation of T cells: negative selection
Medulla. T cells expressing TCRs with high affinity for self antigens undergo apoptosis
How to get to a Th1 cell from a helper T cell
IL-12
how to get to a Th2 cell from a helper T cell
IL-4
How to get to a TH17 cell from a helper T cell
TGF-beta + IL-6
How to get to a Treg cell from a helper T cell
TGF-beta
Naive T cell activation
- foreign antigen is phagocytosed by dendritic cell
- foreign antigen is presented on MHC II and recognized by TCR on Th (helper) cell. Antigen is presented on MHC I to Tc (cytotoxic) cell.
- Costimulatory signal is given by interaction of B7 (on dendritic) and CD28 (on T cell)
- Th cell activates and produces cytokines. Tc cell activates and is able to recognize and kill virus infected cell
B cell activation and class switching
- helper T cell activation is completed
- B cell receptor-mediated endocytosis; foreign antigen is presented on MHC II and recognized by TCR on Th cell.
- CD40 receptor on B cell binds CD40 ligand on Th cell
- Th cell secretes cytokines that determine Ig class switching of B cell. B cell activates and undergoes class switching, affinity maturation, and antibody production
Th1 helper T cell: activated by? Activates? Inhibited by?
Secretes IFN-gamma
Activates macrophages and cytotoxic T lymphocytes (CD8)
Inhibited by IL-4 and IL-10 (from Th2 cells)
Th2 cells: activated by? Activates? inhibited by?
secretes IL-4, IL-5, IL-6, IL-13
Recruits eosinophils for parasite defense and promotes IgE production by B cells
Inhibited by IFN-gamma (from Th1 cells)
Macrophage-Lymphocyte interaction
Macrophages release IL-12, which stimulates T cells to differentiate into Th1 cells, Th1 cells release IFN-gamma to stimulate macrophages.
Cytotoxic T cells
kill virus infected, neoplastic, and donor graft cells by inducing apoptosis.
Release cytotoxic granules containing preformed proteins (perforin-helps to deliver the content of granules into target cell, granzyme B- a serine protease, activates apoptosis inside target cells; granulysin-antimicrobial, induces apoptosis).
Cytotoxic T cells have CD8, which binds to MHC I on virus-infected cells
Regulatory T cells
Help maintain specific immune tolerance by suppressing CD4 and CD8 T cell effector function. Identified by expression of cell surface markers CD3, CD4, CD25 (alpha chain of IL-2 receptor), and transcription factor FOXP3
Activated regulatory T cells produce anti-inflammatory cytokines like IL-10 and TGF-beta
Fab region of antibody
Antigent-binding fragment
Determine idiotype: unique antigen binding pocket; only 1 antigenic specificity expressed per B cell
Fc region of antibody
Constant, Carboxy terminal, Complement binding, Carbohydrate side chains, Determines isotype (IgM, IgD….)`
Antibody diversity is generated by
Random Recombination of VJ (light chain) or V(D)J (heavy chain) genes
random combinations of heavy chains with light chains
Somatic hypermutation following antigen stimulation
Addition of nucleotides to DNA during recombination by terminal deoxynucelotidyl transferase
what part of antibody recognizes antigen
Variable part of the L and H chains
Fc portion of IgM and IgG fixes what
fixes complement
What do the heavy and light chains contribute to in the structure of an antibody
Heavy: both Fc and Fab fractions
Light: only Fab fraction
What do mature B lymphocytes express on their surface
IgM and IgD
(may differentiate in germinal centers of lymph nodes by isotype switching into plasma cells that secrete IgA, IgE, or IgG
IgG
main antibody in secondary (delayed) response to antigen. Most abundant isotype in serum. Fixes complement, crosses the placenta (provides infants with passive immunity), opsonizes bacteria, neutralizes bacterial toxins and viruses.
IgA
Prevents attachment of bacteria and viruses to mucous membranes; does not fix compliment
Monomer (in circulation) or Dimer (when secreted).
Crosses epithelial cells by transcytosis. Most produced antibody overall, but released into secretions (tears, saliva, mucus) and early breast milk (colostrum). Picks up secretory component from epithelial cells before secretions
IgM
Produces in the primary (immediate) response to antigen Fixes complement, does not cross placenta, Antigen receptor on the surface of B cells. Monomer on B cell or pentamer when secreted. Shape of pentamer allows it to efficiently trap free antigens out of tissue while humoral response evolves. #1 antibody if no class switching.
IgD
Unclear formation. found on the surface of many B cells and in serum
IgE
Bind mast cells and basophils; cross-links when exposed to allergen, mediating immediate (type-1) hypersensitivity through release of inflammatory mediators such as histamine. Mediates immunity to worms by activating eosinophils. Lowers concentration in serum.
Antigen type and memory: Thymus-independent antigens
Antigens lacking a peptide component (e.g. lipopolysaccharides form gram - bacteria); cannot be presented by MHC to T cells. Weakly or nonimmunogenic; vaccines often require boosters (e.g. pneumococcal polysaccharide vaccine). So major antibody will be IgM since no class switching
Antigen type and memory: thymus dependent antigens
Antigens containing a protein component (e.g. diptheria vaccine). Class switching and immunologic memory occur as a result of direct contact of B cells with Th cells (CD40-CD40 ligand reaction).
What are acute phase reactants
Factors whose serum concentrations change significantly in response to inflammation; produced by the liver in both acute and chronic inflammatory states. Induced by IL-1, 6, TNF alpha, and IFN-gamma
Acute Phase reactant: Serum amyloid A
Upregulated: prolonged elevation can lead to amyloidosis
Acute Phase reactant: C reactive protein
Upregulated: opsonin that fixes complement and facilitates phagocytosis
Acute Phase reactant: Ferritin
Upregulated: Binds and sequesters iron to inhibit microbial scavenging
Acute Phase reactant: Fibrinogen
Upregulated: Coagulation factor; promotes endothelial repair; correlates with ESR
Acute Phase reactant: Hepcidin
upregulated: Prevents release of iron bound by ferritin can lead to anemia of chronic disease
Acute Phase reactant: albumin
downregulated: reduction conserves amino acids for positive reactants
Acute Phase reactant: Transferrin
Downregulated: internalized by macrophages to sequester iron
Membrane Attack Complex (MAC) defends against what type of bacteria
Gram negative bacteria
Name the three complement pathways
Classic, Alternative and Lectin
How do you activate the different complement pathways
Classic: IgG or IgM mediated
Alternative pathway: microbe surface molecules
Lectin pathway: mannose or other sugars on microbe surface
What does this complement component do: C3b
opsonization, helps clear immune complexes
What does this complement component do: C3a
anaphylaxis
What does this complement component do: C4a
anaphylaxis
What does this complement component do: C5a
anaphylaxis and neutrophil chemotaxis
What does this complement component do: C5b-9
cytolysis by membrane attack complex
How do you inhibit complement system
Decay-accelerating factor (DAF, aka CD55) and C1 esterase inhibitor help prevent complement activation on self cells (e.g. RBC)
What is the C3 convertase for the alternative pathway
C3bBb
What is the C3 convertase for the lectin pathway
C4b2b
What is the C3 convertase for the classic pathway
C4b2b