Module 10 Flashcards
Host microbe interactions
Commensal
host provides shelter/environment for bacteria (benefit bacteria)
Mutualistic
mutual benefit
Pathogenic
damages host
microbiome
functional collection of different microbes in a system
microbiota
community of microorganisms present in a habitat
Metagenomic
genetic material in a given environment
colonization
microbes present and grow on non sterile external body surface
basic steps to infection
enters body sites, overgrows, induces immune response
disease
damages caused by infection
normal microbiota
total microbial population associated with a human
mainly bacteria
10^13 human cells + 10^14 bacteria cells
different classes of microbes and explain
transient: short term, highly variable, high external influence
resident: long term, stable, limited external influence
functions of micrbiota
digest nutrients
provide nutrition
educate/prime host defenses
colonization resistance
how is microbiota esablished
at birth by feeding
how is microbiota unstabilized
hormone fluctuations during puberty
factors in microbiota development
drivers(host and microbiota)
microbe-microbe interactions
habitat filtering
skin microbiome (3)
low diversity (dry and salty)
transient populations on surfaces, resident in pores
mostly commensal, some mutualistic
respiratory tract microbiome (4)
site specific composition
oral cavity: biofilm communities
nasal and upper: similar to skin/mouth
lower: few transient
genito-urinary microbiome
urine is sterile, first 1cm of urethra has transient
vaginal has non specific defenses, acidic
intentional microbiota alteration
fecal transplant
probiotics
prophylactic antibiotics
antispetics
intestinal microbiome
highest populations and great diversity
mutualistic
composition impacted by diet
unintentional microbiota alteration
dysbiosis from antibiotic use
FMT cure rate and use
60-90% cure rate
only used to combat recurring C diff
works by creating competition not wiping out
probiotic
living microorganisms for competitive exclusion
prebiotics
nutrients to help out microbes
symbiotics
mix of pre and probiotics
original koch postualte
suspect causative agent not in healthy
suspect must be isolated, grown, and put into organism to test
issues with koch postulate original
not designed for virus
does not account for asymptomatic carriers
no longer ethical to deliberately infect
pathogenicity
ability to cause disease
virulence
degree of pathogenicity
ID50
infectious dose