Microscopy Flashcards

1
Q

Thinnest picture is by

A

Scanning Electron Microscopy

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2
Q

Light microscope kind

A

1- phase contrast
2- fluorescence microscope

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3
Q

Electron microscopes kind

A

1- transmission electrons
2- scanning electrons

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4
Q

Three elements needed for imaging

A

1- source of illumination
2- speciemen to be examined
3- system of lenses

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5
Q

Condenser lens

A

In front of light source

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6
Q

Objective lens

A

Closest lense to object

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7
Q

Ocular lens

A

Magnify image created by objective lense

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8
Q

Magnification

A

Size of the image vs object

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9
Q

Empty magnification

A

Maginified without resolution

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10
Q

Resolving power is

A

Resolution

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11
Q

Resolution allows object to

A

Be distinguished

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12
Q

Resolution

A

Minimum distance two points can be apart and remain apart

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13
Q

Magnification consider

A

1- refraction index of lens
1- medium that sample is immersed in
2- focal length of lens

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14
Q

Resolution considers

A

1- wavelength of illumination
2- refraction index
3- angular aperture

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15
Q

Longer wavelength

A

Larger object observed

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16
Q

Shorter wavelength

A

Smaller object obseved

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17
Q

Abbe equation

A

r=0.61landa/nsin(alpha)

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18
Q

Magnification in air and oil

A

1000 and 1400

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19
Q

Lighting

A

How light reflects off an object

20
Q

Contrast

A

Difference in appearance between object and its background

21
Q

Bright field microscopy

A

Light microscope
White light passed through specimen
Living sample are nearly invisible
Better image if stained:fixed

22
Q

Bright field stain

A

Stain with dye absorb specific wavelength
Different dye for different biomolecules

23
Q

Phase contrast

A

Light microscope
Use differences in refractive index and thickness
Without the need to section/stain
Turn Phase differences to brightness

24
Q

Differential Interference Contrast

A

Shadow-casting effect
Cells dark on one side
Light on the other side
3D image

25
Fluorescence Microscopy
Detect fluorescent proteins Use laser beam to illuminate a single plane of fluorescently
26
Excitation is ——— wavelength than emission
Smaller/shorter
27
Excitation filters
Transmit only light of particular wavelengths
28
Dichroic mirror
Reflect light below a certain wavelength
29
Emission filter
Prevent light from exiting microscope
30
Immunostaining uses ——— to locate specific molecules
Antibidies
31
Immunofluorescence microscopy advantage
-high specifity -string signal -identifies proteins in their native environment
32
Immunofluorescence microscopy disadvantage
Experiment on dead cell Might not be any available antibody
33
GFP
Green Fluorescent Protein
34
GFP advantage
Cellular events in living cell
35
GFP disadvantaged
Introducing the gfp-tagged protein
36
Confocal fluorescence microscopy
Optical sectioning: produce in-focus images 3D reconstruction Distinguish structures in the middle of the cell from top and bottom
37
Advantage of fixed cells
1- sectioning thick tissue 2- easier to manage samples 3- no need to recombinant protein
38
Advantage of live cell
1- movement of biomolecules within a cell 2- critical context to your observation
39
Electron microscope
Use of beam of electrons and electromagnets
40
Electron microscope types
1- scanning electron microscopes 2- transmission electron microscope
41
Scan electron microscopes
Surface is scanned Detecting electrons from outer surfaces
42
Transmission electrons microscope
Electrons are transmitted through the specimen
43
Cryo-Et microscopy
Take multiple 2D images at different angles and crrate a 3D reconstruction
44
Fluorrescense recovery after photobleaching (FRAP)
Measure how fast a molecule moves (Bleach an area and see how long takes for unbleached molecules to return)
45
Fluorescense Resonance Energy Transfer (FRET)
Measure if two molecules are touching (If closer than 10nm one can excite other)