Microbiology: Virology Flashcards
What 3 DNA viruses are not linear?
Hepadnavirus (circular, incomplete), papillomavirus (circular, supercoiled), and polyomavirus (circular, supercoiled)
What properties of the PrPsc prion protein enable its infectivity?
Transmissible via infected CNS tissue (iatrogenic Creutzfeldt-Jakob disease [CJD]) or food (variant CJD); resistant to degradation by proteases & standard sterilization procedures
In which viral family do viruses have single-stranded circular RNA that is both positive sense and negative sense (ambisense)?
Arenaviruses
What hepatitis virus can initially present like serum sickness?
Hepatitis B
Where does the herpes simplex virus-2 lie latent?
Sacral ganglia
What roles do hemagglutinin and neuraminidase play with influenza infection?
Hemagglutinin promotes viral entry by binding to sialic acid; neuraminidase promotes virion release
What is the RNA structure of the deltavirus?
Enveloped, single-stranded, negative-sense, circular RNA with an uncertain capsid
Which RNA virus family does the often fatal Marburg hemorrhagic fever belong to?
Filoviruses
Name the family of each of the hepatitis viruses (HAV, HBV, HCV, HDV, HEV).
HAV - RNA picornavirus; HBV - DNA hepadnavirus; HCV - RNA flavivirus; HDV - RNA deltavirus; HEV - RNA hepevirus
What viral infections are associated with intranuclear eosinophilic Cowdry A inclusions?
Herpes simplex virus-1 (HSV-1), herpes simplex virus-2 (HSV-2), varicella-zoster virus (VZV)
What does a heterozygous CCR5 gene mutation indicate for the disease course in a patient with HIV?
Slower disease course
Name the 7 positive-stranded RNA viruses.
I go to a retro (retrovirus) toga (togavirus) party and drink flavored (flavivirus) Corona (coronavirus) and eat hippie (hepevirus) California (calicivirus) pickles (picornavirus)
Name the 4 RNA viruses that have segmented genomes.
Reovirus (10-12 segments), orthomyxovirus (8 segments), arenavirus (2 segments), and bunyavirus (3 segments)
What is the only positive-sense RNA virus with a helical capsid?
Coronaviruses
What phenomenon might be seen in a patient with severe croup?
Pulsus paradoxus caused by upper airway obstruction
Which RNA virus family does Ebola hemorrhagic fever belong to?
Filoviruses
What is the test of choice for skin and genital findings suggestive of herpes simplex virus?
Viral culture
What condition in humans is caused by picornaviruses (except rhinovirus and hepatitis A)?
Aseptic meningitis
Infections with which organisms are possible when the CD4+ count is <200 cells/mm3?
JC virus reactivation, Pneumocystis jirovecii, HIV infection leading to dementia, and Histoplasma capsulatum
How can hepatitis C be acquired?
Intravenous drug use or blood transfusions
What mediates the granular eosinophilic “ground glass” appearance found on a liver biopsy specimen of hepatitis B?
Cytotoxic T-cell damage causes the granular eosinophilic appearance
What is the DNA structure of the hepatitis B virus?
Enveloped, partially double-stranded, circular DNA
Palivizumab is used to prevent respiratory syncytial virus (RSV) in what age group?
Premature infants (Palivizumab for Paramyxovirus [RSV] Prophylaxis in Preemies)
What vaccine has made mumps uncommon?
MMR (measles, mumps, rubella)
What is the function of the 2 envelope proteins on the surface of HIV
Gp120 helps HIV adhere to CD4+ T cells; gp41 facilitates HIV fusion/entry
What is the viral receptor for rabies?
Nicotinic acetylcholine receptor
What RNA family contains the hepatitis E virus?
Hepevirus
What is the definition of viral genetic recombination?
Gene exchange between 2 chromosomes via crossing over that occurs within regions of significant base sequence homology
Which naked (nonenveloped) viruses are DNA viruses?
Papillomavirus, Adenovirus, Parvovirus, Polyomavirus (PAPP)
In what parts of the world is hepatitis E infection most common?
Asia, Africa, and the Middle East
Which populations are at particularly high risk for rotavirus?
Infants and young children, especially in day care centers and kindergartens
Name the 6 negative-stranded viral families.
Arenaviruses, Bunyaviruses, Paramyxoviruses, Orthomyxoviruses, Filoviruses, Rhabdoviruses (Always Bring Polymerase Or Fail Replication)
Which hepatitis serologic markers are found during the window period?
IgM anti-HBc and anti-HBe
Two viruses coinfect a cell. Virus A becomes partially or completely coated with virus B proteins, but progeny have type A genome and coat. What is this called?
Phenotypic mixing
What is seen on biopsy of tissues infected with cytomegalovirus?
Cells with intranuclear inclusion bodies (owl’s eye appearance)
How does HIV integrate its genome into the host DNA?
Reverse transcriptase converts HIV viral RNA to double-stranded DNA, which then integrates into host DNA
Which lobe of the brain is most commonly affected in herpes encephalitis?
Temporal lobe
What diseases are caused by paramyxoviruses?
Parainfluenza, mumps, measles, RSV, and human metapneumovirus (which causes bronchiolitis/pneumonia in infants and children)
Name 2 coreceptors HIV can use to enter immune cells?
CXCR4 (on T-cells for late infection) and CCR5 (on macrophages for early infection)
Name 6 viral families that are single-stranded, positive-sense, linear RNA viruses with icosahedral capsids.
Picornavirus, hepevirus, calicivirus, flavivirus, togavirus, and retrovirus (HTLV only)
By way of what surface marker does Epstein-Barr virus (human herpes virus-4) infect B cells?
CD21 (“must be 21 to drink Beer in a Barr”)
What is the purpose of neuraminidase on the parainfluenza viral membrane?
Promotes progeny virion release
During which phase of HIV infection does the CD4+ cell count drop most sharply?
Acute phase (first 1–2 months)
What 2 animals act as reservoirs for the yellow fever virus?
Monkeys and humans
Viruses A and B infect a cell. A mutates and becomes nonfunctional; B makes a protein that functions for both A and B. What is this called?
Complementation
What biopsy finding is consistent with Kaposi sarcoma?
Lymphocytic inflammation (caused by human herpesvirus-8)
What presentation might cytomegalovirus infection have in the population with HIV/AIDS?
Colitis, encephalitis, pneumonitis, esophagitis, and retinitis
Why are purified nucleic acids of certain dsDNA and positive-strand ssRNA viruses infectious?
The dsDNA and ssRNA can utilize host cell machinery (eg, polymerases)
What stage of hepatitis B infection does positive anti-HBe and anti-HBc IgM indicate?
Window period
Which human papillomavirus (HPV) serotypes are associated with warts?
1, 2, 6, and 11
What are 3 general mechanisms for Zika virus transmission?
Transmitted by Aedes mosquito bites (most common), but sexual and vertical transmission are possible
Parvovirus B19 uses what receptor to attach to red blood cells?
Parvovirus B19 uses the P antigen
According to the CDC guidelines, what medical conditions are contraindications for rotavirus vaccination in infants?
History of intussusception or Severe Combined Immunodeficiency (SCID)
How is Ebola transmitted? I
Direct contact with body fluids, fomites (including corpses), infected bats/primates; nosocomial infection is common
Name 4 medically significant conditions caused by bunyaviruses.
California encephalitis, Crimean-Congo hemorrhagic fever, sandfly/Rift Valley fevers, hantavirus infection (hemorrhagic fever, pneumonia)
What is the test of choice for the diagnosis of Zika virus?
Reverse transcription polymerase chain reaction (RT-PCR) or serology
What CD4+ count is associated with esophagitis from a Candida albicans infection in patients with HIV/AIDS?
<100 cells/mm3
Which DNA virus is single stranded?
Parvovirus, the rest of the DNA viruses are all double stranded
What are the most common endocrine manifestations of hepatitis C?
↑ risk of diabetes mellitus and autoimmune hypothyroidism
In what central nervous system tissue are negri bodies commonly found in rabies infection?
Cerebellum (Purkinje cells) and/or hippocampus
What is the RNA structure of the filovirus?
Enveloped, single-stranded, negative sense, linear with a helical capsid
From what cellular structure do enveloped viruses generally get their envelopes?
From the plasma membrane as they leave the cell
How do the Epstein-Barr virus (EBV) and strep throat differ in their cervical lymphadenopathy locations?
EBV is more strongly associated with posterior cervical lymphadenopathy; strep throat involves anterior cervical lymphadenopathy
What is the prognosis for hepatitis B in adults and neonates?
Adults, mostly a full resolution; neonates, a worse prognosis
What virus causes global infantile gastroenteritis?
Rotavirus (ROTAvirus = Right Out The Anus)
What molecular characteristic allows the hepatitis C virus to outsmart host antibodies?
Lack of 3′-5′ exonuclease activity leads to antigenic variation of HCV envelope proteins and new viral mutant strains
What are the 2 most common renal manifestations of hepatitis B?
Membranous glomerulonephritis > membranoproliferative glomerulonephritis
How are the HIV envelope proteins formed?
The env gene encodes gp160 precursor that is cleaved into gp120 and gp41
What is the smallest DNA virus?
Parvovirus
What is the RNA structure of the picornavirus?
Non-enveloped, single-stranded, positive-sense, linear RNA with an icosahedral capsid
What are initial symptoms of Ebola?
Abrupt onset of flu-like symptoms, high fever, diarrhea/vomiting, myalgia
Name 2 viruses found in the reovirus family.
Rotavirus and coltivirus
What virus may be responsible for non-Hodgkin lymphoma development in patients with HIV/AIDS?
Epstein-Barr virus
What are symptoms of mumps?
Parotitis, Orchitis, aseptic Meningitis, Pancreatitis (mumps makes your parotid glands and testes as big as POM-Poms)
What type of capsid shape do most negative-sense RNA viruses have and with what exception?
Helical; delta viruses have uncertain capsid symmetry
How can hepatitis E be acquired?
Via the fecal-oral route, especially from waterborne sources
What is the RNA structure of the arenavirus?
Enveloped, single-stranded, positive- and negative-sense, circular (in 2 segments) RNA with a helical capsid
How is the chicken pox transmitted?
Via respiratory secretions or contact with fluid from vesicles
Describe the structure of the genome of most DNA viruses.
Most of them have a double stranded, linear genome
What is the function of hemagglutinin on the parainfluenza viral membrane?
Promotes viral entry by binding to sialic acid
What is the ploidy of the HIV genome?
Diploid RNA
What virus family does parainfluenza (causes croup) belong to?
Paramyxoviruses
What characteristic liver biopsy findings are seen in hepatitis C?
Lymphoid aggregates, focal macrovesicular steatosis
What is the disease that can occur with rapid-onset dementia and ataxia after eating beef from infected cattle?
Bovine spongiform encephalopathy (BSE), also known as “mad cow disease”
What is the RNA structure of the calicivirus?
Non-enveloped, single-stranded, positive-sense, linear RNA with an icosahedral capsid
Which HIV proteins are located in the envelope, matrix, and capsid, respectively?
Envelope: gp120 and gp41; matrix: p17; capsid: p24
Name the viral family that is made up of double-stranded RNA viruses with double icosahedral capsids.
Reoviruses
How does transmission for herpes simplex virus- (HSV) 1 and 2 differ?
HSV-1 is spread in respiratory secretions and saliva; HSV-2 is spread by sexual contact and perinatally
What is the route of transmission for hepatitis A?
Via fecal-oral (through ingestion of contaminated shellfish, exposure during travel, or in dayca
If the receptor intracellular adhesion molecule 1 (ICAM-1) is blocked, what virus will have difficulty infecting the cells?
Rhinovirus (binds to ICAM-1); “take a picture of the rhino with a camera”
What is the definition of moderately immunocompromised in HIV?
CD4+ count: 200-400 cells/mm3
Which of the hepatitis-causing viruses is the only DNA virus?
Hepatitis B virus (hepadnavirus)
What causes pandemics versus epidemics?
Genetic/antigenic shift causes pandemics; genetic/antigenic drift causes epidemics (sudden shift is more deadly than gradual drift)
Name some of the conditions caused by herpes simplex virus-1.
Keratoconjunctivitis, herpes labialis, herpetic whitlow, encephalitis, erythema multiforme, esophagitis, gingivostomatitis
Which 2 picornaviruses commonly cause aseptic meningitis?
Echovirus and coxsackievirus
Which DNA virus replicates outside of the nucleus?
Poxvirus; it has a DNA-dependent RNA polymerase and can replicate without nuclear enzymes
What is the RNA structure of the coronavirus?
Enveloped, single-stranded, positive-sense, linear RNA with a helical capsid
What infection in a patient who is HIV ⊕ with a CD4+ count <100 cells/mm3 presents with a TB-like disease and lymphadenitis?
Mycobacterium avium-intracellulare, Mycobacterium avium complex infection
What serologic markers would you expect in a patient immunized against Hepatitis B?
⊕ Anti-HBs (all other hepatitis B markers negative)
How is hepatitis B acquired?
Methods of acquiring HBV: Parenteral (Blood), sexual (Baby-making), perinatal (Birthing)
What disease presents with esophagitis and linear ulcerations on esophagogastroduodenoscopy (EGD) in the population with HIV/AIDS with a CD4+ count <100 cells/mm3?
Cytomegalovirus esophagitis
What dermatological conditions can be seen in patients with hepatitis C?
Sporadic porphyria cutanea tarda and lichen planus
What CD4+ count is associated with oral thrush from a Candida albicans infection in patients with HIV?
<500 cells/mm3
Where does herpes simplex virus-1 lie dormant?
Trigeminal ganglia
What is the RNA structure of the orthomyxovirus?
Enveloped, single-stranded, negative-sense, linear (in 8 segments) RNA with a helical capsid
A patient recently returned from Brazil with conjunctivitis, low-grade fever, and an itchy rash. You suspect a flavivirus to be the cause. What is the most appropriate treatment?
Supportive care (diagnosis: Zika virus infection)
Why can hepatitis D (HDV) infection only occur in conjunction with hepatitis B (HBV) infection?
HDV is a defective virus so it relies on the HBV HBsAg coat for entry into hepatocytes
What 5 RNA viruses are picornaviruses?
Poliovirus, Echovirus, Rhinovirus, Coxsackievirus, Hepatitis A virus (PERCH on a “peak” [picornavirus])
Which 2 RNA viruses do not replicate in the cytoplasm?
Retrovirus and influenza virus (retroflu is outta cyt [sight])
Which 3 DNA virus families contain circular DNA?
Papillomaviruses, polyomaviruses, and hepadnaviruses; all other viruses have linear DNA
What rodent-borne bunyavirus causes a hemorrhagic pulmonary syndrome?
Hantavirus
How can cytomegalovirus present in adults?
Mononucleosis in immunocompetent patients; retinitis, esophagitis, and infection in immunocompromised patients (pneumonia in transplant patients)
Rhinovirus has how many serotypes?
> 100 serologic types of rhinovirus
What gene mutation can cause immunity to HIV?
Homozygous CCR5 mutation (prevents HIV binding on macrophages)
What virus family does rhinovirus belong to?
Picornavirus
What is the DNA structure of hepadnaviruses?
Enveloped, partially double-stranded, circular DNA
What findings might be seen on fundoscopic exam in a patient with vision loss due to cytomegalovirus retinitis?
Hemorrhage and cotton-wool exudates
Other than animal bites, by what method of transmission can rabies also occur?
Aerosol transmission (in bat caves)
Which naked (nonenveloped) viruses are RNA viruses?
Calicivirus, Picornavirus, Reovirus (CPR), and hepevirus
What is the DNA structure of polyomaviruses?
Non-enveloped, double-stranded, circular DNA
What serological marker is best to detect acute hepatitis A?
Immunoglobulin M hepatitis A virus antibody (anti-HAV IgM)
What test can be performed in the setting of an inconclusive differentiation assay for HIV?
HIV-1 nucleic acid test (NAT)
Which of the 2 viruses that can lead to roseola is a less common cause of the disease?
Human herpes virus-7 (HHV-7) is a less common cause than human herpes virus-6 (HHV-6)
What is the DNA structure of parvovirus?
Non-enveloped, single-stranded, linear DNA (this is the smallest of the DNA viruses)
Other than the vasculature, what other anatomic locations can Kaposi sarcoma affect?
Gastrointestinal tract and lungs
Which serologic marker indicates prior infection (or vaccination) and protects against reinfection with hepatitis A?
Immunoglobulin G anti-hepatitis A virus antibody (anti-HAV IgG)
What test can be done to confirm the diagnosis of HIV if the HIV-1/2 Ag/Ab immunoassay is positive?
HIV-1/2 antibody differentiation immunoassay (which determines whether it is HIV-1 or HIV-2 infection)
Which hepatitis types can be transmitted by blood?
Hepatitis B, C, and D
What virus family does Ebola belong to?
Filovirus
By what mechanism does rotavirus cause gastroenteritis?
Rotavirus causes destruction of the intestinal villi, thus impairing Na+ absorption and leading to K+ wasting
Two segmented viruses undergo reassortment and produce a new, highly virulent strain. What is this process called?
Antigenic shift
Which calicivirus commonly causes viral gastroenteritis?
Norovirus
What stage of hepatitis B infection does positive HBsAg, HBeAg, and anti-HBc IgM indicate?
Acute stage of infection
Which disease caused by a poxvirus has been eradicated through the use of a live attenuated vaccine?
Smallpox
What is the RNA structure of the flavivirus?
Enveloped, single-stranded, positive-sense, linear RNA with an icosahedral capsid
Which organ transplant does the BK virus commonly target?
Kidneys; BK virus = Bad Kidney virus