Microbiology Flashcards

1
Q

what organisms make up normal vaginal flora

A

Lactobacillus spp. [predominate]

Strep Viridans
Group B beta-haemolytic Strep
Candida spp

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2
Q

why is Lactobacillus spp. important for the vagina flora

A

produced lactic acid +/- hydrogen peroxide

which suppress growth of other bacteria

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3
Q

what does it mean by beta-haemolytic

A

complete clear zone around it

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4
Q

what are the non-sexually transmitted genital tract infections

A
Candida infection (“vaginal thrush”)
Bacterial vaginosis

Prostatitis

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5
Q

what are predisposing factors for a candida infection

A

Recent antibiotic therapy

High oestrogen levels (pregnancy, certain types of contraceptives)

Poorly controlled diabetes

Immunocompromised patients (severely immunocompromised)

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6
Q

what is the Sx of candida infection

A

intensely itch white vaginal discharge
- “cottage cheese”

spotty rash - just in C. balanitis

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7
Q

diagnosis of candida infection

A

Clinical diagnosis

High Vaginal Swab [HVS] for culture

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8
Q

Tx for candida infection

A

1st line - Topical Clotrimazole 500mg 2-3 times daily

2nd line - Oral Fluconazole 150mg as a single dose + Topical Clotrimazole

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9
Q

what is the appearance of c. albicans

A

yeasts structure with budding

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10
Q

what is the Sx of bacterial vaginosis

A

thin, watery, fishy-smelling vaginal discharge

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11
Q

Ix of bacterial vaginosis

A

clinical diagnosis
raised vaginal pH (pH > 4.5)
HVS = looking for presence of clue cells

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12
Q

Tx of bacterial vaginosis

A

Metronidazole 500mg twice daily

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13
Q

what is the classification of prostatitis

A
  1. Acute bacterial prostatitis
  2. Chronic bacterial prostatitis
  3. Chronic prostatitis/chronic pelvic pain syndrome (CP/CPPS)
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14
Q

Sx of acute bacterial prostatitis

A

Sx of UTI [dysuria, frequency, nocturia, haematuria]

lower abdomen pain, back/perineal/penile pain,

tender prostate O/E

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15
Q

what organism is responsible for acute bacterial prostatitis

A

E.Coli

- same as UTI

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16
Q

if a patient has acute bacterial prostatitis, what else should they be tested for

A

STI in patients < 35y/o: Gonorrhoea, chlamydia

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17
Q

Ix for acute bacterial prostatitis

A

Clinical signs + MSSU for C&S

First pass urine for STI tests

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18
Q

Tx for acute bacterial prostatitis

A

1st line = Ciprofloxacin for 28 days

2nd line = Trimethoprim for 28 days if high C. Diff risk

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19
Q

what is the commonest bacterial STI in the UK

A

Chlamydia trachomatis

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20
Q

what can chlamydia affect

A

urethra, rectum, throat and eyes

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21
Q

how does chlamydia strain with gram stain

A

NO stain

- no peptidoglycan in the cell wall

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22
Q

what are the 3 serological groupings of chlamydia

A

Serovars A-C = Trachoma (eye infection) (NOT an STI)
Serovars D-K = Genital infection
Serovars L1-L3 = Lymphogranuloma venereum

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23
Q

Tx of chlamydia

A

Azithomycin (1g oral dose) for uncomplicated chlamidia

Doxycycline 100mg bd x 7 days

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24
Q

what is Lymphogranuloma venereum

A

inflammation of the rectum

- can mimic crohns disease as people think they need to go to the toilet

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25
what does neisseria gonorrhoea affect
urethra, rectum, throat, eyes, endocervix
26
how does neisseria gonorrhoea appear on gram staining
Gram negative diplococcus | - Look like “2 kidney beans facing each other”
27
Ix of chylamydia and gonorrhoea
NAAT or PCR - tests for both For males, need first pass urine sample For females, HVS or vulvo-vaginal swab (VVS)
28
what is the advantages of PCR/NAAT over culture
less invasive more sensitive takes hours for result [not days]
29
what is the disadvantages of PCR/NAAT over culture
Cannot test antibiotic sensitivities without culture, so difficult to track antibiotic resistance Will detect dead organisms
30
how long do you have to wait to do a test of cure
5 weeks
31
Tx of gonorrhoea
IM ceftriaxone + oral azithromycin
32
what causes syphilis
Treponema pallidum
33
how does Treponema pallidum stain
does not stain with gram stain
34
what are the 4 stages of syphilis
1y lesion (chancre) 2y stage Latent stage Late stage
35
what is 1y lesion stage
organism multiplies at inoculation site and gets into bloodstream. Chancre will heal without treatment
36
what is 2y lesion stage
large nos. bacteria circulating in blood with multiple manifestations at different sites (“snail-track” mouth ulcers, generalised rash, flu-like symptoms etc.)
37
what is the latent stage
no symptoms, but low-level multiplication of spirochaete in intima of small blood vessels. Can be divided into early latent and late latent periods. Not infectious in the latent stage.
38
what is late stage syphilis
cardiovascular or neurovascular complications many years later
39
Ix of syphilis
1 - Swab of 1y or 2y lesions for PCR 2 - Serology – tests for non-specific and specific antibodies to T. pallidum in blood
40
what are the two type of tests done in serology of syphilis
non specific - indicates how active the disease is - useful to monitor the response to treatment specific - confirm diagnosis
41
1st line test for syphilis
IgM & IgG ELISA
42
2nd line test for syphilis if 1st line positive
IgM ELISA VDRL test TPPA test
43
Tx for syphilis
2.4 IM Benzathine penicillin x1 if penicillin allergic - Doxycyline 100mg oral + Prednisolone 40-60mg
44
what is the commonest viral STI
genital warts
45
what causes genital warts
HPV
46
what types of HPV are associated with pathology
6 & 11 = genital warts 16 & 18 = risk of cervical cancer
47
how is genital warts spread
by close genital skin contact
48
diagnosis of genital warts
clinical
49
Tx for genital warts
cryotherapy; podophyllotoxin cream/lotion
50
what vaccine is given for HPV
quadrivalent vaccine give to 11-13 year old girls immunises against types 6,11,16 & 18
51
how do genital warts appear
whiter than the surrounding skin with a rough surface
52
what causes genital herpes
HSV type 1 and type 2 | HSV-1 and HSV-2
53
what is HSV-1 also associated with
cold sores
54
how are genital herpes spread
genital/genital or oropharyngeal/genital contact
55
what is the pathogenesis of genital herpes
Primary infection may be asymptomatic (or very florid) Virus replicates in dermis and epidermis Gets into nerve endings of sensory and autonomic nerves Inflammation at nerve endings Virus migrates to sacral root ganglion and “hides” from the immune system there Virus can reactivate from there causing recurrent genital herpes attacks
56
presentation of genital herpes
exquisitely painful multiple small vesicles, which are easily deroofed
57
Ix for genital herpes
Swab deroofed blister for PCR test
58
Tx for genital herpes
pain relief | aciclovir may help if taken early enough
59
what is Trichomonas vaginalis
single celled protozoal parasite
60
Sx of Trichomonas vaginalis
vaginal discharge irritation urethritis in males
61
Ix and Tx of Trichomonas vaginalis
HVS for microscopy Oral metronidazole
62
what is Tx for lice
malathion lotion