microbiolgy flash Flashcards
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Ionizing radiation
High enough energy to knock electron out of orbit. Ex. X-ray, UV is NOT
mole
6.02x10^23 particles
molar
6.02x10^23 particles dissolved to final volume of 1L
pH
is equal to -log [H+]
cofactor
May be needed for a functional catalytic site (Ex. Fe or Zn)
coenzyme
NAD+ or FAD (both are vitamin derivatives)
artifacts
loss of tissue
Metachromasia
Change in color of stain due to interaction with cellular or extracellular components
Periodic Acid Shift (PAS)
Stains glycoproteins
Haemotoxylin
Stains acids (or basophilic)(neg. charge) structures blue. Nucleus, RNA
Eosin
Stains basic (or acidophilic)(+ charge) structures red
Diffuse through membrane
Lipid soluble (uncharged) molecules. Ex. water
Pinocytosis
Cell is sampling enviroment, non-specific intake
Receptor mediated endocytosis
proteins bind and a vesicle then forms to bring components into cell
Phagocytosis
Pseudopodia extend and engulf item (Ex. Bacteria)
Cytoskeleton composition
Made of polymerized subunits (including soluble cytoskeleton subunits). Microtubules, microfilaments, intermediate filaments
Microtubules
Hollow, polar, (+) end grows/shrinks. Function: Forms tracks for ATPase, form cilia, flagella, centriole and mitotic spindles
Dynein
Move to (-) end of microtubule
Kinesine
Move toward (+) end of microtubule
Cilia
9+2 arrangment, made of microtubules
Centrioles
Mone pair per cell, each has 9 triplets of microtubules at right angles. Located in center of cell. Attach to mitotic spindles to help cell divide
Spindle MT
Spindle integrity and elongation
Kinetochore MT
chromosome seperation
Microfilaments
Assembled from actin, formsvery small polar, helical array, grow on (+), shrink on (-). Function: microvilli, cytokinesis
Intermediate filaments
Function: Desmosomes, hemidesmosomes, maintain tissue level integrity, Can be used to determine origin of tumor
Lysosome
Origin: ER/golgi. Fuse with endosomes, phagosomes and agred organelles. Mannose-6-P distinguishes. Proton pumps in membrane to lower pH
Peroxisome
Oxidation reactions for long chain FA, produces H2O2 (degraded by catalase). Origin: ER
Hemosiderin
Accumulation of heme
Protein syn. Finishes in cystol target to:
Cytosol, nucleus, mitochondria, peroxisomes, or exocytosis
SRP
signal recognition particle that recognizes string of neutral AA, arrests protein synthesis, lines up the docking protein on the ER and then releases for translation to continue
Proteins syn. In ER/golgi target to:
Secretion, lysosome, golgi, ER
sER
Function: lipid metabolism, glycogen metabolism, detoxification, Ca2+ sequestration
Tetracyclin
Antibiotic that disrupts bacterial ribosomes
rER
Post translational modification of proteins
Golgi
Center most organelle. Function: carb addition/ modification, mannose-6P addition, sulfation, phosphorylation, cleavage
capsid
Protein protective coat
Virion
Protein protective coat + RN/DNA
DNA Viruses
ReDIEL: replicate in nucleus, ds, isosahedral virions, enveloped, linear genome
Retroviruses
Viruses that use DNA intermediate. Requires RNA-dep-RNA-pol., non-infectious, undergoes reverse transcription
(+) sense RNA
Infectious, does not require RNA dep. RNA pol., infectious, translation
(-) sense RNA
Requires RNA-dep-RNA-pol., non-infectious, transcription
ds RNA
Requires RNA-dep-RNA-pol., non-infectious, transcription
RNA virus
ReSHEL: replicated in cytoplasm, ss, helical, enveloped, linear genome
Bacteriophage
Bacteria that infect viruses. Outer protein than encloses genetic material
Quasispecies
group of related viruses that exist wthin an individual at one point in time
Reassortment
Co-infection of a cell by 2 viruses that then exchange genes. Generates viral diversity
Hyperplasia
Increase in cell number, takes place in tissues capable of cell division (neurons, cardiac m., skeletal m. do not undergo
Neoplasia
Abnormal increase in cell number
Hypertrophy
Increase in cell size
Atrophy
Decrease in size or number of cells
Metaplasia
Adaptive response to persistant stress, replace one type of cell with another. Often reversible if irritant is removed
Dysplasia
Preneoplastic change that involved cellular atypia (abberant maturation, enlarged nuclei, nuclear hyperchromasia)
Liver steatosis
Lipid accumulation in liver, can lead to atherosclerosis
Prokaryote
no nuclear envelope, single circular plasmid, cell wall (peptidoglycan), no carbs, 70s ribosome
Eukaryote
Bound nucleus, multiple chromosomes, organelles, no peptidoglycan, sterols and carbs present, 80s ribosome
Gram (+)
Retain crystal violet, has thick cell wall and no outer membrane, teichoic acid
Gram (-)
Retain safarin red counter stain, has outer membrane, lipopolysaccharide, lipid A (has endotoxin activity), lysozyme resistant
Beta-lactam
Enters bacteria and leads to membrane destruction and autolysins
Prophage
Virus integrated into host chromosome
Plasmid
Circular, dsDNA, small (5-100 genes), have origin of replication
Transformation
DNA fragments uptaken into bacterial cell
Transduction
When virus is packaging viral DNA some host DNA is included and carrier to new host
Conjugation
Bacteria with F(fertility)+ factor makes sex pilli that conjugates with F-
Episome
Plasmid integrated into host chromosome
Primary Ciliary Dyskinesia
Impaired ciliary movement due to loss of inner or out dynein arms. Sym: sinusitis, bronchiectasis, situs inversus, male immobile sperm, female fertility trouble
Epidermolytic bullosa simplex (EBS)
Mutation in keratin resulting in skin shearing due to lack of intermediate filaments