Micro - Bacteria Flashcards
catalase test
GP
staph (+)
strep (-)
coagulase test
GP
staph aureus (+) staph epidermidis or saprophyticus (-)
novobicin test
GP
staph epidermidis (sens) staph saprophyticus (resis)
hemolysis
GP
streptococci (a, ß, g)
alpha hemolysis
GP
Strep. pneumoniae (capsule)
Strep. viridans (no capsule)
- differentiate btwn the two using optochin + bile solubility
ß hemolysis
GP
Strep pyogenes (grpA)
Strep agalactiae
Staph aureus
Listeria monocytogenes
LAAP = listeria, aureus, agalactiae, pyogenes
gamma hemolysis
GP
enterococcus
non-enterococcus
optochin sensitivity
GP
Strep. pneumoniae - sensitive
Strep. viridans - resistant
bile solubility
GP
Strep. pneumoniae - soluble (lysed by bile)
Strep. viridans - not lysed by bile
bacitracin
GP
S. pyogenes (sensitive)
S. agalactiae (resistant)
growth in bile and 6.5% NaCl
GP
Enterococcus faecalis
growth in bile, not 6.5% NaCl
GP
Strep. bovis
B cells typically infected by this virus
EBV
Ganglion cells typically infected by this virus
herpes
oligodendrocytes typically infected by this virus
JC virus –> PML
Measles –> SSPE
follicular dendritic cells typically infected by this virus
HIV
grows at 42˚C
GN, oxidase +, comma shaped
campylobacter jejuni
grows in alkaline media
GN, oxidase +, comma shaped
vibrio cholera
produces urease
GN, oxidase +, comma shaped
helicobacter pylori
GN diplococci
2
neisseria meningitidis
neisseria gonorrhoeae
differentiate using maltose test
maltose test is used for..
neisseria MeninGitidis (fermenter - maltose + glucose) neisseria Gonorrhoeae (non-fermenter - glucose only)
GN “coccoid” rods
4
haemophilus influenza (requires factor V, X)
Bordtella pertussis
Pasturella - animal bites
Brucella
Requires factor V, X
haemophilus influenza - GN coccoid rods
can also be grown with staph aureus, which provides factor V
lactose fermenters (rate) - Macconkey’s
GN
klebsiella, e. coli, enterobacter (fast fermenter)
citrobacter, serratia (slow fermenter)
MaconKEES
lactose non-fermenters
how do differentiate between them?
All GN
Shigella Salmonella Proteus Yersinia Pseudomonas
Oxidase test - only pseudomonas are oxidase +
oxidase test - which bugs are +? -?
Oxidase (-) Shigella Salmonella Proteus Yersinia
Oxidase (+) Pseudomonas Campylobacter Vibrio cholerae Helicobacter pylori
oxidase +, comma shaped
campylobacter jejuni - grows at 42˚
vibrio cholera - alkaline media
helicobacter pylori - urease
bacterial infection associated with schistocytes
EHEC - eating undercooked meats
Shigella
Staph aureus virulence factor
Protein A - binds Fc-IgG - inhibits complement activation and phagocytosis; colonizes the nose
TSST
superantigen that binds to MHCII and TCR, resulting in polyclonal T cell activation
present in vaginal or nasal tampons
S. aureus food poisoning is due to
preformed ENTEROTOXIN - heat stable (not destroyed by cooking)
S. epidermidis is commonly associated with
What would you treat a hospitalized patient with?
how do you differentiate this from S. saprophyticus?
prosthetic devices
IV catheters
*contaminant of blood cultures
treat with vanco pending sensitivity tests because they can be resistant to multiple antibiotics
SE: Catalase (+), Coagulase (-), Novobicin (S)
SS: Catalase (+), Coagulase (-), Novobicin (R)
S. saprophyticus
at risk for what?
how do you differentiate this from S. epidermidis?
UTI - second most common cause; increased risk of struvite stones (Ammonium MgPO4)
novobicin resistant
SE: Catalase (+), Coagulase (-), Novobicin (S)
SS: Catalase (+), Coagulase (-), Novobicin (R)
S. pneumo
causes
how to differentiate
Meningitis Otitis media pneumonia Sinusitis sepsis in sickle cell patients and splenectomy rusty/reddish brown
a hemolysis (green)
SP: capsule, optochin (S), bile (S)
SV: ø capsule, optochin (R), bile (R)
shape of s. pneumo?
virulence factor?
lancet shaped GP diplococci, encapsulated
IgA protease
s. viridans
how do differenitate it from S. pneumo?
alpha hemolytic, optochin R
can cause
- dental caries (mutans)
- normal inhabitant of the mouth (mitis)
- subacute bacterial endocarditis on damaged valves (sanguinis)
a hemolysis (green)
SP: capsule, optochin (S), bile (S)
SV: ø capsule, optochin (R), bile (R)
how does strep. sanguinis cause subacute bacterial endocarditis
binds to fibrin-platelet aggregates on damaged heart valves
GAS is also known as
S. pyogenes
diseases that S. pyogenes cause
pharyngitis, cellulitis, erysipelas, rheumatic fever, PIGN
things that S. pyogenes produce?
Streptolysin O: degrades cell membranes; lyses RBC
Exotoxin A: superantigen - causes release of IFNg, IL2 –> shock
M protein - prevent phagocytosis virulence factor
S. pyogenes sensitivity?
what must you differentiate it from?
ß hemolysis (clear)
GAS (Spyogenes): Bacitracin (S); ASO titers
GBS (S. agalactiae): Bacitracin (R), Hippurate test (+), CAMP test
GBS is also known as
S. agalactiae
things that S. agalactiae cause?
what happens if you find out that a mother is colonized with GBS within a month of her due date?
neonatal sepsis, meningitis, pneumonia
must give INTRApartum penicillin or ampicillin
GDS is also known as
what does it cause?
what do you have to differentiate it from?
S. Enterococci - cocci chains
subacute endocarditis after GI/GU procedures, can cause UTIs, biliary tract; penG resistant
gamma hemolysis
S. Enterococcus (GDS: E. faecalis, E. faceium): bile and NaCl (+)
S. bovis : bile (+) only
S. Bovis cuases
endocarditis after colonic malignancy
clostridum - different types and what do you normally find them on?
CBotulinum: honey, bottles/canned food
CPerfringens: soil or raw meat, reheated meat dishes
CDiff: antibiotic use (clindamycin or ampicillin”
shape of clostridium?
GP Rod
clostridium tetanus produces
Tetanospasmin - protease that cleaves SNARES –> prevents release of GABA and glycine from Rhenshaw cells in spinal cord –> spasticity/sustained muscle contraction
Clostridium botulinum produces
Botulinum toxin - heat-labile protease that cleaves SNARES –> prevents release of ACh at NMJ –> floppy/descending flaccid paralysis
Clostridium perfringens produces
Alpha Toxin - lecithinase that degrades tissues and cell phospholipid membranes –> myonecrosis/gas gangrene + diarrhea
C diff produces
Toxin A (enterotoxin) binds to brush border of gut
Toxin B (cytotoxin) causes cytoskeletal disruption via actin polymerization –> pseudomembrane –> diarrea
white fibrinous pseudomembrane should make you think of this bug
Corneybacterium diphtheriae
Corneybacterium diphtheriae shape?
what does it produce?
Rod w/ blue+red granules (corn is rod-shaped)
Diphtheria Toxin - AB toxins exotoxin encoded by ß prophage, inactivates EF-2 via ribosylation; predilection for cardiac + neural cells
3 tests that you can use for Corneybacterium diphtheriae
Tellurite agar - dark black, slightly iridescent colonies
Loffler medium - cytoplasmic GRANULES that can be stained w/ aniline dye (methylene blue)
Elek Test for toxin
elongated Rod box-car chains should make you think of..
Bacillus anthracis - Aerobe, spore forming
Bacillus anthracis causes
painless black eschar w/ edematous borders, mediastinal widening
spores can be present on wool
Bacillus anthracis virulence factor
polypeptide capsule (D-glutamate) - antiphagocytic
Edema Factor - mimics adenylate cyclase to incr. cAMP”
reheated rice, pasta should make you think of…
bacillus cereus - GP Rod, spore forming
bacillus cereus produces
Cereulide - preformed toxin –> watery dairrhea
Listeria Monocytogenes - features
GP rod with tumbling motility - rocket tails (actin) that propel them into cells (intracellular)
catalase +, LPS (UNIQUE!!!), ß hemolysis
Listeria Monocytogenes - where is it normally found on?
unpasteurized milk, soft cheeses, deli meats
transplacental or vaginal transmission –> meningitis in neonates and elderly
Mycobacterium - features
GP Rod; mycolic acid w/ high lipid content obligate aerobe (use O2 to generate ATP) - lung apices
reactivation of Mycobacterium is usually due to…
Immunocompromised state or TNFa inhibitors (infliximab or adalimumab)
two virulence factors of mycobacterium?
Cord-factor- inhibits macrophage maturation; induces release of TNFa
Sulfatides (surface glycolipids) - inhibit phagolysosomal fusion
Mycobacterium tubuerculosis symptoms
fever, night sweats, weight loss, hemoptysis
MAC - when does it normally occur? how do you deal with it?
AIDS, CD4 <50; prophylaxis w/ Azithromycin; usually unable to form the caseating granulomas