Lecture 9: Epidemiology of Infectious diseases Flashcards
What is the disease triangle, what does it infer
viurs, host, environment
- all factors infleunce eachother
- combined effects infuence risk
outbreak
sudden increase in occurence
pandemic
outbreak that has spread across a wide region
Endemic
cases at a baseline level in a geographic area
Pathogen
microbe able to damage the host
Infection
colonisation/invasion of a host by a pathogen
Opportunistic pathogen
microbe that takes advantage of an opportunity to cause infection
What is the host range
- he breadth of organisms a parasite is capable of infecting
- host-restricted, broad host range
List some sources of pathogens
self and others, food and drink, environemnt, air (fomites), insects and animals
List the some modes of transmission
airborne, droplet, drinking and eating, bodily fluid, direct contact, isect bite, surgery
explain how drugs and genetics play a role in pathogenesis
- risk factors
- can increase susceptibility to disease or influence how disease plays out
List some risk factors of disease
age, exising/underlying medical conditions, gentics, hospital/surgery, medication, contact
what is R0 and what does it depend on
- measure of infectiousness (proprotional)
- how many people does 1 case infect
- R0 > 1 –> exponential spread
- depends on organism, dose, route of transmission
What is Reff
Effective R
takes into account public health measures like vaccination
Incubation period
time between exposure to infectious microbe and onset of symptoms
what does the incubation period depend on?
- organism
- infecting dose
- immunity of the person
- person may be infectious or not depending on organims
clinical disease rate
proportion of infected people who develop disease
organism, exposure, immunity of the person
Infection fatality rate
estimated deaths as a proportion of all infected
case fatality rate
deaths as a proportion of confirmed cases
what does fatality rate depend on
organism, infecting dose, immunity of the person, treatments
immuntiy rate
number of people immune to reinfection
Explain the pathogenesis of Ebola
- Attachment - glyocoprotein binds to TIM-1receptor molecules
- Penetration - viral envelope fuses with the host cell
- Uncoating - release of nucleic acid. polymerase protein turns it into mRNA template
- Translation - mRNA uses host cell system to replicate vital DNA
- Budding - New vopies of virus bud from cells
How do you get the Ebola virus?
direct contact wit
1. bodily fluids of a person who is sick or has died from Ebola
2. Objects contaminated with the virus
3. Infected animals
How is Ebola transmitted/spread
only spreads when people are sick - must be symptomatic to spread disease
Mortality rate Ebola
25-100%
What three areas had the largest case and deat rate in the 2014 outbreak?
Guinea, Liberia and Sierra Leone
What is the treatment for Ebola
Monoclonal antibodies - neutralise virus