kingdoms, viruses, pathogens Flashcards

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1
Q

do bacteria have chloroplasts

A

no

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2
Q

Transcription/translation occurs in same compartment of ___ everyone else does it in diffferent compartmetns

A

bacteria. note that even protists do transcription and translation in diff compartments

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3
Q

what component is in cell walls

A

peptidoglycan

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4
Q

flagella in eukaryotes vs bacteria

A

9+2 for cilia /flagella in eukaryotes, protists, plantae. Bacteria have their own special flagella- rotary motor

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5
Q

three domains of living things

A

bacteria, archae, eukarya

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6
Q

Pathogen

A

something that causes a disease

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7
Q

Archaea

A

primitive type cells. Different enough that they are NOT closely related to other bacteria- but they ARE prokaryotes. No nucleus. Also called ‘extremophiles’ because they like to live in hot springs, glaciers, etc. no effect on health/disease. Own kingdom.

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8
Q

explain how ancestral eukaryotes evolved

A

an archae type picked up a mitochondria . Gives rise to fungi, animalia, etc. the archae that picked up photosynthetic bacteria became chloroplasts-> plants, protists

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9
Q

how many kingdoms are there

A

6

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10
Q

why are viruses not living?

A

They MUST be inside of a host cell to replicate- cannot do it on their own.

  • Have no metabolism
  • No oxygen consumed, no ATP used, etc
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11
Q

lifecycle of a phage- lytic vs lysogenic?

A
  • Once DNA has been injected, could go a couple of ways
  • Lytic cycle: take over cell right then and immediately start transcribing/translating viral genes. breaks open host cells
  • Lysogenic cycle: turn off repressor proteins, repressor protein says ‘don’t break open!’- has potential to be converted back into viral factory stage. Has potential to break open and produce new virus.
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12
Q

replication cycle DNA virus

A

1) Attachment (Adsorption)
2) Penetration
3) Uncoating
4) Targeting
5) Gene expression.
- synthesis of viral mRNA (transcription)
- synthesis of viral proteins (translation)
6) Genome replication
7) Virion assembly/maturation
8) Release of new infectious virus
- lysis : breakdown of cell membrane and release of virus
- budding: viruses “bud” through cell membrane and are released without necessarily killing the cell. Viruses acquire envelopes (membranes) during this process.

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13
Q

Replication cycle for RNA virus

A
  • Carries its own reverse transcriptase- so it can copy its own RNA and animal cells do not have any reverse transcriptase in them
  • Note: reverse transcriptase critically important in cloning as it creates cDNA. It’s the only enzyme that will use RNA as a template. Howard Temin + David Baltimore Nobel prize for this.
  • Binds 2 cell. HIV viruses only attack T-cells. Have marker on surface called CD4. It’s the surface marker that hiv viruses recognize in order to bind to target cells.
  • Copy RNA into double stranded dna. Why? Much more stable
  • Double stranded dna inserts itself DIRECTLY INTO GENOME OF HOST CELL.

Once in host genome; transcription of DNA produces RNA’s that are the genome for an RNA virus. Same RNA gets translated by ribosomes and makes viral proteins, assemble new viruses, and then bud out.

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14
Q

difference between DNA virus vs RNA virus replication: genome

A

DNA virus not incorporating itself into genome

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15
Q

why do RNA viruses carry their own reverse transcriptase with them?

A

so it can copy its own RNA- animal cells do not have any reverse transcriptase in them

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16
Q

what marker would you use to test for HIV?

A

CD4

17
Q

mutation in CCR5 protein- what is it and what does it lead to?

A

no functioning CD4 receptor for the virus to hook onto- totally HIV resistant (if homozygous)

18
Q

common tests for HIV

A
  • t-cell count
  • virus titer (count # viruses)
  • western blot (southern blot with proteins) use anti HIV antibiotics to detect gp120 (envelope protein) sits on surface. Direct test for nucleic acid.
  • Can also detect patient antibody against gp120: if they’re making antibody, it means they have been exposed
19
Q

treatment for HIV

A
  • AZT- azidothymadine- form of nucleotide that is dideoxy- has an amino group instead of 3’ OH group. Synthesis of DNA will STOP at dideoxy. Just like it did in some sort of sequencing reaction we were discussing.
  • The reason it is so efficient at interrupting the RNA virus is that Reverse transcriptase has a higher affinity for AZT (as opposed to normal thymine) azt is just a mutated form of thymine.
20
Q

what is combination therapy for HIV?

A

AZT + protease inhibitors (prevent resistance to AZT) . inhibits manufacture of new HIV viruses

21
Q

three types of bacteriophages

A

Lamba phage , T2, T4

22
Q

list out some common manifestations of the herpes virus (DNA) group

A

herpes, cold sores, chicken pox, epstein barr,

23
Q

cancer causing (DNA) viruses?

A

HHV, karposi’s sarcoma. Also cervical cancer comes from papilloma virus.

24
Q

give some examples of RNA retroviruses

A

HIV, polio, yellow fever

25
Q

rabies/mumps/measles/flu/ebola/hep C- all what type of virus?

A

RNA virus

26
Q

herpes: RNA or DNA virus?

A

DNA

27
Q

influenza: DNA or RNA virus?

A

RNA

28
Q

prion diseases

A

brain issues- proteins fold into the wrong shape- due to infection via prion, which is NOT a virus but behaves like one

29
Q
A