Introduction in enzymes Flashcards
Enzymes are mainly
Enzymes are mainly proteins that facilitate biochemical reactions
Ribozyme is an non protein enzyme= RNA splicing
Enyzmes are biological what
catalysts.
Systemic enzymes
Active throughout the body
Tissue specific enzymes
Active in a specfic area
Can measure the acitivity of these enzymes to
-Can measure the ACTIVITY of these enzymes in the blood to
ascertain whether these organs have been or are being damaged.
-Abnormal serum enzyme levels are found in various diseases and
inflammation
Cofactor/ coenzyme
1) Protein or non-protein
2) Permanent or temporary
3) Essential factor for the enzymes which
require cofactor
Competitive inhibition
Compete for enzyme active site
Allosteric inhibition
Binds to a seperate site other then the active site and changes the active site shape
Proenzyme
Zymogens- Inactive or less active precursor of enzyme
- Proteolytic modification required to be
activated
Zymogen examples
Angiotensinogen,
trypsinogen, pepsinogen,
chymotrysionogen, prolipase
Enzyme kinetics
-Enzymes speed up reactions
-Enzymes work by converting a substrate into a product via an
enzyme-substrate complex:
E + S–> ES=
+1
ES–> E+S=
-1
ES—> E +P=
+2
E+P–> ES
-2
Enzyme reaction
E+S–> ES—> E+P
Km= formula
(K-1+ K2)/ K1
Km= Dissociation/ Association
Vmax=
Is the reaction rate when the enzyme is fully saturated by substrate
Km=
Is the substrate concentration that is required to make the speed reach 1/2 Vmax
How does the enzyme speed up the reaction rate
1.) Lowering acitivation energy
2.) increasing the rate constant
3. increasing substrate specificity ( or Substrate concentration)
Reaction rate=
K[S]to the X power [S] to the Y power
Rate= [A]^x * [B]^y
Delta G=
Product energy- Reactants energy
negative delta G =
Exergonic or energy releaseing
Activation energy=
The amount of energy required to make a reaction move forward
Factors influencing the rate of the reaction
what concentrations
- Enzyme concentration
[Enzyme], the faster the product formation
b/c more enzymes = more enzyme/substrate complexes
Substrate concentration
* Substrate readily binds to the enzyme at low concentrations.
* [substrate], the rate of reaction increases.
* But [substrate] too high, enzyme Saturation
The shape of a protein effects its
The shape of the protein affects its activity”
Anything that alters the conformation of the
protein/enzyme will have an impact on its activity.
pH effects what
- Fluctuation of pH: alter “ionizable group(s)” on the enzyme affect
the enzymes shape.
**significant change in pH can cause the enzyme to denature. - Change equilibrium position [H+ involved reaction]
- Enzymes require a pH: 7 – 8
- Exceptions: alkaline phosphatase, Acid phosphatase, Pepsin
What enzymes dont require a pH of 7-8
Alkaline phosphatase, Acid phosphatase, and Pepsin
Creatine + ATP with enzymes Mg2+ and CK—>
P-creatine + ATP + H+
Temperate and inhibitors effects what
-Temperature increases increase in molecular collisions increase
in the rate of reaction.
**Too high temperature cause the protein denature decreasing the rate
of reaction.
* Optimal temperature is close to physiological temperature (37ºC)
4.Temperature
5.Presence of Inhibitor influences rate of reactions
Single (end) point assays
- Incubate sample with substrate for a period of time
- Measure the end absorbance (O.D.)
- Calculate enzyme level by comparing to the [STD]
Kinetic assays
- Incubate sample with substrate
- Measure the absorbance over time at certain increments
- An average change in absorbance (product formation) is
used to calculate “enzyme activity”