Imprinting and X-inactivation Flashcards

1
Q

What is androgenesis?

A

A male is the sole source of the nuclear genetic material in the embryo.

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2
Q

What is parthenogenesis?

A

A natural form of asexual reproduction in which growth and development of embryos occur without fertilisation by sperm.

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3
Q

What is a hydatidiform mole?

A
  • Results from androgenesis - normal sperm cell fertilises one of these oocytes, the resulting embryo has only one set of chromosomes (no genes from the mother)
  • Mostly homoxygous 46,XX
  • Proliferation of abnroaml trophoblast tissue
  • No remaining embryo
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4
Q

What can hydatidiform moles sometimes progress into?

A

Malignant trohphoblastic tumour

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5
Q

What are ovarian teratomas?

A
  • Parthenogenetic conceptions
  • Bizarre tumor, usually benign, in the ovary that typically contains a diversity of tissues (hair teeth, bone but NO skeletal muscle)
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6
Q

Where are ovarian teratomas derived from?

A

Derived from oocytes which have completed first or both meiotic divisions - diploid

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7
Q

Why do parthenogenetic embryos die?

A

Due to failure of development of extraembryonic structures (trophoblast, yolk sac)

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8
Q

Why do androgenetic embryos die even though they have well developed extraembryonic membranes?

A

No maternal genes - poor embyro development

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9
Q

What is genomic imprinting?

A
  • A mechanism that ensures the functional non-equivalence of the maternal and paternal genomes
  • Not encoded in the DNA nucleotide sequence (i.e. epigenetic)
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10
Q

How is Angelman syndrome caused?

A

Most cases of Angelman syndrome are not inherited, particularly those caused by a deletion in the maternal chromosome 15 or by paternal uniparental disomy . These genetic changes occur as random events during the formation of reproductive cells (eggs and sperm) or in early embryonic development.

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11
Q

What is Angelman syndrome characterised by?

A
  • Facial dysmorphism
    • Prognathism, wide mouth, drooling
    • Smiling/laughing appearance
  • Mental handicap
    • Microcephaly
    • Absent speech
  • Seizure disorder
  • Ataxic, jerky movements
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12
Q

How is Prader-Willi syndrome caused?

A

PWS is not generally inherited, but rather the genetic changes happen during the formation of the egg, sperm, or in early development (genetic imprinting)

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13
Q

Characteristics of PWS?

A
  • Infantile hypotonia
    • Feeding problems
    • Gross motor delay
  • Mental handicap
  • Male hypogenitalism/cryptorchidism
  • Small hands and feet
  • Hyperphagia
    • Obesity
  • Stereotypic behaviour
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14
Q

What cytogenetic abnormality is found in both Angelman and Prader-Willi syndromes?

A

Deletion of chromosome 15 (always de novo):

  • In Angelman, it is always the maternal chromosome 15 that carries the deletion
  • In Prader-Willi, it is always the paternal chromosome 15 that carries the deletion
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15
Q

What is a de novo mutation?

A

A genetic alteration that is present for the first time in one family member as a result of a variant (or mutation) in a germ cell (egg or sperm) of one of the parents, or a variant that arises in the fertilised egg itself during early embryogenesis.

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16
Q

What 2 mutations are possibly involved in PWS?

A
  • 70% deletion of chromosome 15 (paternal)
  • 25% UPD (2 copies of chromosome come from mother)

I.e. in both cases there is an absence of a paternal chromosome 15

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17
Q

What 3 mutations are possibly involved in Angelman syndrome?

A
  • 75% deletion chromosome 15 (maternal)
  • 1% UPD (both copies of chromosome come from father)
  • 2-5% point mutation (maternal)

I.e. in all cases there is an absence of materal chromosome 15

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18
Q

What are imprinted genes?

A

Imprinted genes are genes whose expression is determined by the parent that contributed them.

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19
Q

What is DNA methylation?

A
  • Post-synthetic DNA modification that involves methyl groups being added to the DNA molecule
  • Epigenetic: can change the activity of a DNA segment without changing the sequence
  • DNA methytransferases involved
  • Reversible
20
Q

Where does DNA methylation occur?

A
  • Occurs at CG dinucleotides
  • Many promoter regions spared
    • CG “islands”
21
Q

When is gene expression termed ‘monoallelic’?

A

When only one of the two copies of a gene is active, while the other is silent (imprinted genes show this).

22
Q

What do paternal genes promote? What can a lack of paternal genes lead to?

A
  • High fetal fitness
  • Evolutionary advantage for father
    • If polygamous

A lack of paternal genes can lead to increased fetal mortality - decreased paternal reproductive fitness

23
Q

What can increased maternal genes lead to?

A

These genes act to restrain foetal growth so act to constrain this growth (balance of maternal and paternal genes)

24
Q

What is Beckwith-Widemann syndrome (BWS)?

A

an overgrowth disorder usually present at birth

25
Q

What causes BWS?

A

Beckwith-Wiedemann syndrome are caused by abnormal regulation of imprinted genes in the BWS critical region

26
Q

Characteristics of BWS?

A
  • Fetal overgrowth
    • High birthweight (>5 kg)
    • +/- normal adult size
  • Organomegaly
    • Exomphalos
  • Hypoglycaemia
  • Asymmetry
  • Tumour risk
  • Sporadic occurrence
  • (Epi)genetic abnormalities
    • 11p15
27
Q

What causes Russel-Silver syndrome?

A

Can be associated with asymmetry of balance of maternal and paternal genes

28
Q

What is Russel-Silver syndrome?

A
  • Growth retardation
    • Fetal (IUGR)
    • Persistent postnatal growth failure
  • Triangular face
    • Brain size more preserved
  • Sporadic occurrence
29
Q

What region is involved in both BWS and SRS?

A

Region of 11p15.5 within which the growth controlling gene insulin-like growth factor 2 is located

30
Q

What is IGF-2?

A

Major fetal growth promoter

31
Q

What 2 growth diseases can molecular abnormalities in the 11p15.5 imprinted gene cluster lead to? What are these mainly caused by?

A
  1. Beckwith-Wiedemann syndrome (BWS)
  2. Silver-Russell syndrome (SRS)

They are mainly caused by epigenetic alterations in one of the two imprinting 11p15 control regions (ICR1 and ICR2).

32
Q

Describe the difference in methylation in this region of 11p15.5

A

These CpG-rich regions are differentially methylated on the maternally and paternally derived chromosomes:

  • Methylated on paternal allele and unmethylated allele on maternal allele in normal state
  • In disease state:
    • SRS: both alleles epigenetically resemble the normal maternal allele (unmethylated)
      • Hypomethylation –> decreased IGF2 –> SRS
    • BWS: both alleles epigenetically resemble the normal paternal allele (methylated)
      • Hypermethylation –> increased IGF2 on normally silent maternal allele –> BWS
33
Q

What is X-inactivation?

A

a process by which one of the copies of the X chromosome is inactivated in females

34
Q

What is the purpose of X-inactivation?

A

As females have two X chromosomes, X-inactivation prevents them from having twice as many X chromosome gene products as males, who only possess a single copy of the X chromosome –> dosage compensation

35
Q

How is the choice of X-inactivation determined?

A

The choice of which X chromosome will be inactivated is random in humans

36
Q

How is X-inactivation passed down?

A

The descendants of each cell which inactivated a particular X chromosome will also inactivate that same chromosome.

37
Q

How does X-inactivation differ from imprinting?

A
  • Whole X chromosome is silenced (not just a gene)
  • Random choice of parental chromosome (based on parent of origin in imprinting)
  • Occurs early in embryogenesis (in the cells of the early blastocyst)
38
Q

What is X-linked inheritance?

A

A pattern of inheritance for a genetic condition that occurs when a copy of a gene located on the X chromosome has a genetic variant (or mutation).

39
Q

Describe recessive X-linked inheritance

A

Recessive X linked conditions are always passed through the maternal line with the condition appearing in males and being carried in females, but not usually expressed.

40
Q

Describe dominant X-linked inheritance

A

Dominant X-linked conditions can be passed from either affected parent to their children. If the father has the affected copy of the gene he will only pass the condition to his daughters and not his sons (as passes X to daughter and Y to son). Mothers can pass X-linked dominant conditions to both their sons and daughters.

41
Q

What inheritance is haemophilia?

A

X-linked recessive

42
Q

What inheritance is Duchenne muscular dystrophy?

A

X-linked recessive

43
Q

What is mosaicsm?

A

Mosaicism is a condition in which cells within the same person have a different genetic makeup.

44
Q

What is uniparental disomy?

A

When a person inherits 2 copies of chromosome both from their mother/father instead of one copy from each parent.

45
Q

In which disease is a deletion in maternal chromosome 15 / paternal uniparental disomy of chromosome 15 seen?

A

Angelman syndrome

46
Q

In which disease is a deletion in paternal chromosome 15 / maternal uniparental disomy of chromosome 15 seen?

A

Prader-Willi syndrome

47
Q
A