Higher Biology Flashcards
What is DNA
An organism’s inherent genetic material, that is used to code for its specific characteristics.
Where is DNA found in animal, plant and fungi cells
The nucleus
Where is DNA found in bacterial cells
Plasmids (ring-like structures of DNA) or the nucleus
What are the large molecules that DNA strands are collectivised and packaged into
Chromosomes
What is the name for a section of DNA that codes for a certain characteristic
A gene
What are the building blocks of DNA
Nucleotides
What do nucleotides comprise of
+ a deoxyribose sugar
+ a phosphate group
+ a base
How many strands does a DNA molecule have
2
What can each DNA strand be referred to as
A sugar-phosphate backbone
Within a sugar-phosphate backbone, what deoxyribose carbon is bound to a phosphate group
3’
What are the four bases
+ Adenine
+ Thymine
+ Guanine
+ Cytosine
What are the base pairing rules
Adenine-Thymine
Guanine-Cytosine
What bond forms between adjacent, complementary bases
Hydrogen bonds
A DNA molecule has an … structure
Antiparallel
What do DNA molecules coil around
Associated proteins/histones
What does the DNA’s antiparallel structure look like
One of the DNA strands has a loose phosphate group at its end, whilst the other end has a deoxyribose sugar.
What end features a deoxyribose sugar
3’
What is a prokaryote
The collective term used to describe bacterial organisms or cells.
What is a eukaryote
The collective term used to describe animal, plant or fungi organisms or cells
Characteristic of eukaryotes:
+ features a nucleus
+ linear chromosomes (in nucleus)
+ some DNA found in chloroplasts and mitochondria
Give an example of an abnormal eukaryote
Yeast cells (feature plasmids)
What is DNA replication
The synthesising of an identical, complementary copy of a DNA molecule - allowing cell division to occur
Why must cell division/DNA replication occur
To maintain an average quantity of bodily cells, as huge quantities die
What is DNA polymerase
The enzyme commonly used during replication, which monitors the addition and conjoining of nucleotides - to create a complementary strand.
From what end of a DNA strand does DNA polymerase add nucleotides
3’
Process of DNA replication (leading strand)
1: DNA molecule unwinds, as hydrogen bonds break
2: Primer attaches to 3’ end of ‘leading strand’
3: loose nucleotides align with complementary bases, from 3’ to 5’
4: DNA polymerase binds them together - creating a complementary DNA strand
5: The initial primer is removed and replaced with nucleotides
6:
Process of DNA replication (lagging strand):
1: primers place down the strand, allowing fragments of loose nucleotides to bind
2: DNA polymerase binds the nucleotides within the fragments
3: DNA ligase binds the fragments together
What are the five requirements of DNA replication
\+ template strand of DNA \+ primers \+ nucleotides with all four bases \+ enzymes (ligament and polymerase) \+ a wealth of ATP
DNA replication allows growth and maintains the…
Chromosome complement
What does PCR stand for
Polymerase chain reaction
What is the goal of PCR
To amplify the quantity of a target DNA strand
What are the 5 requirements for PCR:
\+ template section of DNA \+ a buffer solution \+ Taq polymerase enzyme \+ nucleotides with all four bases \+ primers
What is:
a) a buffer solution
b) Taq polymerase
a) a solution that the target strand of DNA is initially added to, maintaining a constant pH level
b) the enzyme used during PCR that is resistant to extremely high temperatures. It anneals loose nucleotides.
Describe the process of PCR
1: target DNA molecule is heated to 95 degrees Celsius, breaking the hydrogen bonds and separating the two strands
2: the molecule is the. Called to 55-60 degrees Celsius, allowing primers to anneal to the 3’ end of each strand
3: the molecule is heated to 70 degrees Celsius and Taq polymerase aligns and joins complementary nucleotides, from the 3’ end
4: the joined nucleotides form two new strands of DNA
What are three uses of PCR
+ DNA fingerprinting
+ Diagnosis of genetic disorders
+ Solving parental issues
What is an organism’s genome
Their entire store of genetic information
What is gene expresssion
The process by which the information from a gene is used to synthesis specific protein molecules
How do organisms differentiate
By masking the effects of certain genes, meaning only some proteins are produced - dictating the organism’s characteristics
What are the 5 main functions of proteins
\+ enzymes \+ antibodies \+ replication monitors \+ structural \+ hormones
What is an organism’s…
a) phenotype
b) genotype
a) the physical appearance of an organism, based on its genotype
b) the organism’s internal genetic information and sequence
What does gene expression require
RNA molecules
What are 3 structural differences between DNA and RNA molecules
+ RNA nucleotides contain a uracil base, instead of thymine
+ RNA nucleotides confiance ribose sugars, instead of deoxyribose
+ RNA molecules are single-stranded
What are the three types of RNA molecule:
+ mRNA
+ tRNA
+ rRNA
What is the role of mRNA
It synthesis a complementary copy of the nucleus’s DNA and transports it to the cell’s ribosome- as DNA molecules are too large to leave the nucleus.
What is the role of tRNA
Used during gene expression, as it locates loose amino acids and carries them to the ribosome
What is the structure of a tRNA molecule
3D and Clover-shaped, due to self-adjoining hydrogen bonds
What is the role of rRNA
Combines with structural proteins to form the ribosome
What is the first stage of gene expression and where does it occur
Transcription
Occurs in the nucleus
Process of transcription:
+ an RNA polymerase enzyme breaks the hydrogen bonds and unwinds a DNA molecule
+ RNA nucleotides align with their complementary DNA bases
+ hydrogen bonds form between the complements
+ an RNA polymerase joins the adjacent RNA nucleotides together and breaks their complementary hydrogen bonds
+ a single strand of ‘primary’ mRNA has now formed
What is required to initiate transcription
A start codon (a sequence of 3 bases that indicates to the nucleotides to join here)
What is required to end transcription
A stop codon
What is the second stage of RNA splicing and where does it occur
RNA splicing
Occurs in the nucleus
What happens during RNA splicing
Introns (non-coding DNA regions) are removed, whilst exons (coding DNA regions) are spliced back together.
What forms as a result of RNA splicing
A mature mRNA transcript, that features the exons in their officinal sequence
What is the process by which different mature mRNA transcripts are created
Alternative RNA splicing
What occurs during alternative RNA splicing
The same exons are spliced together, but in a different order OR old introns are now used as exons
What is the final stage of gene expression and where does it occur
Translation
Occurs in the ribosome
Process of translation:
+ 5’ end of mature mRNA binds to the ri so some
+ start codon begins translation
+ certain codons tell a tRNA molecule to retrieve a corresponding amino acid from the cytoplasm
+ codon and anti-codon from the acid and RNA form a weka hydrogen bond
+ tRNA molecules unbinds and repeat process
+ multiple amino acids form next to one another and join, forming a peptide bond
+ polypeptide of multiple acids forms, that folds in a certain way to create a specific protein and function
What is cellular differentiation
The process by which bodily cells specialise and gain specific function and characteristics
What must genes do during cellular differentiation
‘Switch’ on or off
Depending on their function, they require or do not require certain proteins, which require or don’t require certain genes
What are the undifferentiated areas of plant organisms known as
Meristems
They divide and specialise through mitosis
What are the two main types of meristem
+ Apical
+ Lateral
Where are apical meristems located and what is their function
Located in the roots and shoots of a plant
Primary site of vertical growth
Where are lateral meristems located and what is their function
Located in the stem of a plant
Secondary site of horizontal growth
Give two examples of specialised plant cells
+ xylem (lignin spirals)
+ phloem (sieve cells)
What are undifferentiated cells known as in animals
Stem cells
What are the two main types of stem cell
+ embryonic
+ tissue/adult
Where are embryonic stem cells found
In the blastocyst of an animal embryo. This is the bundle of cells formed before foetal development.
Where are tissue stem cells found
In all of the organism’s bodily tissue
Why are embryonic stem cells pluripotent
As they have the capacity to specialise into all cell types, found within the organism
Why are tissue stem cells multipotent
As they only have the capacity to to specialise into a select, finite number of closely-related cells, based on their function.
What are the therapeutic uses of stem cells
+ treatment of leukaemia - through a bone marrow transplant
+ treatment of skin grafts - healthy cells replaced damaged ones
What are the research-based uses of stem cells
+ test the effects of newly developed drugs on an organism cells
+ causes of disease can be determine day examining diseased stem cells
+ develop understanding of growth and development
What are the ethical issues of stem cells
The use of embryonic stem cells, during research, requires the destruction of an embryo - which has the potential for human life. The foetus must be destroyed before 14 days of existence, or else it may develop vital organs and conscious thought
What does it mean if a cellular process is carried out “in vitro”
It occurs outside its natural location or situation
What are coding genetic sequences known as and what is their function
Genes or exons
Code for the synthesis of proteins
What are non-coding genetic sequences known as and what is their function
Introns
Regulate transcription OR form rRNA or tRNA as they wer etranscribed but never translated
What is a mutation
A sudden, random alteration to the genetic material of an organism
How do mutation manifest themselves
By changing the organism’s genetic base sequence, resulting in the creation of different proteins
How can the rate of mutation be increased
By introducing mutagenic agents, such as chemical radiation
What is a single gene mutation (SGM)
When only one of the DNA molecule’s genes is affected by the mutation, and its protein is altered or removed
What are the three main types of single gene mutation
+ substitution
+ insertion
+ deletion
What is a substitution SGM
When one of the bases, within a genetic sequence, is directly swapped for another.
What are the three types of substitution SGM
+ missense
+ nonsense
+ splice-site
What is a missense substitution
When a base is substituted, meaning a different amino acid forms
What is a nonsense substitution
When a base is substituted, meaning the resultant protein is shortened - as a premature stop codon forms
What is a splice-site substitution
When the splice site of the genome does not function properly, as a base has been substituted, altering the shape and function of the resultant proteins
What is a frame-shift mutation
When the alteration of one base leads to a domino effect of alterations- affecting all subsequent bases.
What is an insertion SGM
When a base is inserted randomly into a genetic sequence. This forces all subsequent bases to move down one, changing all the codons and the resultant protein. FRAME-SHIFT
What is a deletion SGM
When a singular base is removed from a genetic sequence. This forced all previous bases to move down one, altering the resultant codons and proteins. FRAME-SHIFT
What is a chromosome structure mutation (CSM)
When large parts of a chromosome are changed, meaning multiple genes and their resultant proteins are altered
What are the four main types of CSM
+ Duplication
+ Deletion
+ Inversion
+ Translocation
What is a duplication CSM
When a section of chromosome is replicated and this replica joins the structure
What is a deletion CSM
When a section of the chromosome or multiple genes are removed
What is an inversion CSM
When a section of the chromosome detached, rotates 180 degrees and rejoins the structure
What is a translocation CSM
When a section of chromosome detached and joins a separate chromosome
How do mutations contribute to the evolution of a species
They create variation amongst a species, as new alleles are created. This allows natural selection to occur as mutations may hinder or boost the organism’s ability to survive and reproduce - allowing the advantageous mutations to increase in frequency amongst the population.
What CSM allows evolution
Duplication
The replica is free from selection pressures, meaning there is an increased chance of further advantageous mutation
What is evolution
Th term used to describe alterations in the genetic material of an organism, due to generations of genomic variation.
What three processes does evolution involve
Inheritance, selection and speciation
Inheritance is…
The sole method of genetic transfer, between organisms of different or similar species
What are the two types of genetic transfer
+ vertical
+ horizontal
What is vertical gene transfer
Is the typical, textbook form of inheritance, as parents reproduce and transfer identical copies of their genetic material to their offspring