genomics 1.8 Flashcards

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1
Q

sequences of bases and amino acids are known as

A

sequence data

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2
Q

sequence data can be used to study

A

comparative genomics
study of evolution
pharmacogenetics

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3
Q

the special enzymes used to work out the order of dna nucleotide bases is called

A

restriction endonuclease

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4
Q

genomic sequencing

A

restriction endonuclease cuts the dna into smaller fragments at specific dna base sequences called restriction sites

there are many different restriction endonuclease enzymes

each enzyme is specific to a different restriction site along the dna strand

each dna fragment is then sequenced

computer programmes can be used to identify the base sequence by looking for sequences similar to known genes

sequence overlaps of fragments are used to put fragments back in the correct rder and to identify the base sequnece of the whole dna strand

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5
Q

bioinformatics

A

the use of both computer and statistical analysis

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6
Q

conservation

A

genomes from different species share stretches of of the same or similar dna sequences

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7
Q

degree of conservation

A

the number of genes shared between species is a measure of how closely they are related by evolution

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8
Q

why do the genomes of disease causing organisms get sequenced

A

it aids research into finding ways of preventing infections or destroying the pathogens

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9
Q

model organisms

A

the organisms are easy to grow and provide information about cell processes which can be applied to species which are more difficult to study. (widely studied and easy t maintain and breed in the lab.

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10
Q

phylogenetics

A

the study of evolutionary history and relationships,

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11
Q

sequence divergence

A

used to estimate time since lineages diverged

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12
Q

divergence

A

occurs when two or more species arise from a common ancestor, once they diverge each new species’ genome may also be affected by the different mutations

the more time since divergence the more mutations can take place

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13
Q

molecular clocks

A

used to show when species diverged during evolution, the difference in sequence data between species indicate the time of divergence from a common ancestor

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14
Q

they assume constant mutation rate and show differences in dna sequences or amino acid sequences for a particular protein.

A

this may not be the case- the rate of mutation may not be the same for each species being compared

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15
Q

molecular clocks can be created by

A

comparing the number of nucleotide substitutions within
the same gene in a number of different species

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16
Q

limitations of molecular clocks

A

assumes that the rate of mutation is the same for each species being compared but this is not always the case