genomics 1.8 Flashcards
sequences of bases and amino acids are known as
sequence data
sequence data can be used to study
comparative genomics
study of evolution
pharmacogenetics
the special enzymes used to work out the order of dna nucleotide bases is called
restriction endonuclease
genomic sequencing
restriction endonuclease cuts the dna into smaller fragments at specific dna base sequences called restriction sites
there are many different restriction endonuclease enzymes
each enzyme is specific to a different restriction site along the dna strand
each dna fragment is then sequenced
computer programmes can be used to identify the base sequence by looking for sequences similar to known genes
sequence overlaps of fragments are used to put fragments back in the correct rder and to identify the base sequnece of the whole dna strand
bioinformatics
the use of both computer and statistical analysis
conservation
genomes from different species share stretches of of the same or similar dna sequences
degree of conservation
the number of genes shared between species is a measure of how closely they are related by evolution
why do the genomes of disease causing organisms get sequenced
it aids research into finding ways of preventing infections or destroying the pathogens
model organisms
the organisms are easy to grow and provide information about cell processes which can be applied to species which are more difficult to study. (widely studied and easy t maintain and breed in the lab.
phylogenetics
the study of evolutionary history and relationships,
sequence divergence
used to estimate time since lineages diverged
divergence
occurs when two or more species arise from a common ancestor, once they diverge each new species’ genome may also be affected by the different mutations
the more time since divergence the more mutations can take place
molecular clocks
used to show when species diverged during evolution, the difference in sequence data between species indicate the time of divergence from a common ancestor
they assume constant mutation rate and show differences in dna sequences or amino acid sequences for a particular protein.
this may not be the case- the rate of mutation may not be the same for each species being compared
molecular clocks can be created by
comparing the number of nucleotide substitutions within
the same gene in a number of different species