Gene structure + Transcription Flashcards
The central dogma
DNA to RNA to Protein
Transcription
Coding strand and template strand
all types of RNA comes from DNA
mRNA, tRNA,rRNA genes
Genes
on one strand
in one frame
Gene Archiculture
Promotor, Leader, coding region, Terminator
Promoter
Where sigma factor/RNA polymerase binds -start of gene
not transcribed or translated
Leader
Where ribosome binds to mRNA transcript
(contains the Shine-Dalgarno sequence to position mRNA in ribosome)
* Leader is transcribed but not translated (not part of the coding region)
In Bacteria
Initiation
Elongation
Termination
Initiation
RNA polymerase core enzyme +Sigma facter=holoenzyme
Sigma factor binds to the promotor
upstream of the gene that regulates transcription
Sigma factor+RNA polymerase binds to the promoter
Rna polymerase unwinds DNA to a transcription bubble
Elongation
RNA Transcript is synthesized from template strand
RNA Polymerase adds NTPS
unwinds as it goes
Termination
Factor dependent-stem loop with Rho factor, Hybrid DNA:RNA helicase activity
Intrisinic or Rho-independent -stem-loop with poly U,based on sequence alone
Intrinsic or rho-independent
termination
Inverted repeats in DNA, stem loop followed by Poly U region,stem loop causes RNA to pause,
Factor dependent
inverted dna repeats to stem loop to pause, Rho factor binds to Rna,