Gene Action From DNA to Protein Flashcards
Proteins are one of the three major types of nutrients which are abundant in meats, eggs, and legumes. True or False
True
300 types of amino acids are chemically possible. True or False
False - 500 types
20 amino acids are required in our diets for the body to produce its own protein molecules. True or False
True
The 20 biological amino acids have similar frameworks. True or False
True
one or more long chains of amino acids
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Polypeptides
shorter chains of amino acids
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Peptides
proteins helps blood to clot. True or False
True
gives a person the inability to walk because of the lack gigaxonin protein manufactured by motor neurons.
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Giant axonal neuropathy
provides respiratory and digestive problems; ion channel proteins cannot fold properly.
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Cystic fibrosis
synthesizes an RNA molecule that is complementary to one strand of the DNA double helix for a particular gene.
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Transcription
uses the RNA information and makes proteins by aligning and joining specified amino acids.
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Translation
The RNA copy is taken out of the nucleus and into the cytoplasm.
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Transcription
The protein is folded into a specific three-dimensional form necessary for its function
CHOICES:
Polypeptides, Peptides, Transcription, Translation, Cystic fibrosis, Giant axonal neuropathy
Translation
Cells replicate their DNA only during the M phase of the cell cycle transcription and translation occur continuously, except during the S phase. True or False
False - Cells replicate their DNA only during the S phase of the cell cycle transcription and translation occur continuously, except during the M phase.
a strand of the double helix used to make complementary bases for an RNA sequence.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
Template strand
an enzyme that builds an RNA molecule.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
RNA polymerase
nontemplate strand of the DNA double helix.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
Coding strand
usually single-stranded has uracil as a base and ribose as the sugar.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
RNA
usually double-stranded has thymine as a base and deoxyribose as the sugar.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
DNA
It carries protein-encoding information and controls how information is used can function as an enzyme.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
RNA
It maintains protein-encoding information but cannot function as an enzyme
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
DNA
short-lived
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
RNA
more stable
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
DNA
when synthesized RNA folds into a three-dimensional shape that arises from complementary base pairing within the same RNA molecule.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
Conformation
two subunits that are separate in the cytoplasm but join at the site of initiation of protein synthesis.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
Ribosome
has 3 types of rRNA molecules.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
larger ribosomal subunit
has 1 type of rRNA molecule.
CHOICES:
Template strand, RNA, DNA, Conformation, larger ribosomal subunit, smaller ribosomal subunit, Ribosome, Coding strand, RNA polymerase
smaller ribosomal subunit
carries the information that specifies a particular protein
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Messenger RNA (mRNA)
range from 100 to nearly 3,000 nucleotides long
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Ribosomal RNA (rRNA)
Transports specific amino acids to the ribosome for protein synthesis
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Transfer RNA (tRNA)
Encodes sequence amino acid
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Messenger RNA (mRNA)
Associates with proteins to form ribosomes, which structurally support and catalyze proteins synthesis.
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Ribosomal RNA (rRNA)
Each set of three consecutive ______ bases forms a genetic code word, or codon, that specifies a certain amino acid.
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Messenger RNA (mRNA)
binds an mRNA codon at one end and a specific amino acid at the other
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Transfer RNA (tRNA)
500 to 4,500+ number of nucleotides
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Messenger RNA (mRNA)
only 75 to 80 nucleotides long
CHOICES: Ribosomal RNA (rRNA), Messenger RNA (mRNA), Transfer RNA (tRNA)
Transfer RNA (tRNA)
complementary to an mRNA codon
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Anticodon
regulate which genes are transcribed in a particular cell type under particular conditions.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Transcription Factors
transcription factors and RNA polymerase are attracted to a promoter, which is a special sequence that signals the start of the gene.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Transcription Initiation
The first transcription factor to bind, called a ___________ protein
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
TATA binding
TATA binding is chemically attracted to a DNA sequence called a __________
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
TATA box
enzymes unwind the DNA double helix locally, and free RNA nucleotides bond with exposed complementary bases on the DNA template strand.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Transcription Elongation
RNA polymerase joins the complex, binding just in front of the start of the gene sequence.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Transcription Initiation
RNA polymerase adds the RNA nucleotides in the sequence the DNA specifies, moving along the DNA strand in a 3′ to 5′ direction, synthesizing the RNA molecule in a 5′ to 3′ direction.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
Transcription Elongation
A _________________ indicates where the gene’s RNA-encoding region ends.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
terminator sequence
A typical rate of transcription in humans is ___ bases per second.
CHOICES:
Transcription Factors, Transcription Initiation, Transcription Elongation, 20, 30, 50, terminator sequence, TATA box, TATA binding, Anticodon
20
RNA is transcribed using only the gene sequence on the template strand. True or False
True
In bacteria, RNA is translated into protein as soon as it is transcribed from DNA because a nucleus does not physically separate the two processes. True or False
True
In prokaryotic cells, mRNA must first exit the nucleus and enter the cytoplasm, where ribosomes are located. Messenger RNA is altered in several steps before it is translated into more complex cells. True or False
False - eukaryotic cells
part of mRNA rgar are removed
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Introns
part of mRNA that splices together, which are then translated into amino acid sequences or protein
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Exons
mRNA prior intron removal
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
pre-mRNA
extrons may outnumber and outsize introns. True or False
False - introns may outnumber and outsize extrons
It is a mechanism of
combining exons of a gene in different ways and increases
protein diversity.
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Alternate splicing
Particular rRNA codons correspond to particular amino acids. True or False
False - mRNA
Transcription takes place on free ribosomes in the cytoplasm and those in the endoplasmic reticulum. True or False
False - Translation
encode the same amino acid
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Synonymous codons
encode different amino acids
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Nonsynonymous codons
__________ is the starting point of a DNA sequence that encodes a protein.
CHOICES:
pre-mRNA, Alternate splicing, Synonymous codons, Nonsynonymous codons, Reading frame, Exons, Introns
Reading frame
The open reading frame is a stretch of DNA without a stop codon that might indicate a protein-encoding gene. True or False
True
Protein synthesis doesn’t need ATP and GTP. True or False
False - proteins need them
In translation initiation, mRNA leader sequence forms hydrogen bonds with a short sequence of rRNA in a small ribosomal unit. True or False
True
the first mRNA codon to specify an amino acid and it attracts the initiator tRNA
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
AUG
A _________________ binds to the initiation complex to begin elongation.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
large ribosomal subunit
bears the growing amino acid chain
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
P (peptide) site
holds the next amino acid to be added.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
A (acceptor) site
a type of chemical bond that links amino acids with the help of rRNA that functions as a ribozyme—RNA with enzymatic activity.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Peptide bond
stop codon
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
UGA, UAG, UAA
Elongation halts when the A site of the ribosome has a _______, because no tRNA molecules correspond to it
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
stop codon
Proteins fold into one or more __________ caused by attraction and repulsion between atoms of the proteins as well as interactions of proteins with chemicals in the immediate environment.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
conformations
polypeptide’s amino acid sequence
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Primary (1°) structure
forms when a protein consists of more than one polypeptide.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Quaternary (4°) structure
appears as more widely separated amino acids attract or repel in response to water molecules.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Tertiary (3°) structure
forms as amino acids close in the primary structure attract; may form loops, coils, barrels, helices, or sheets.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Secondary (2°) structure
Two common _________ are an alpha helix and a beta-pleated sheet.
CHOICES:
large ribosomal subunit, P (peptide) site, A (acceptor) site, Peptide bond, stop codon, conformations, Primary (1°) structure, Secondary (2°) structure, Tertiary (3°) structure, Quaternary (4°) structure, UGA, UAG, UAA, AUG, AGU, GUA
Secondary (2°) structure
Proteins begin to fold within a minute after the amino acid chain winds away from the ribosome. True or False
True
_________ are not found on proteins synthesized on free ribosomes in the cytoplasm.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Signal sequences
Proteins destined for the nucleus, such as translation factors, are synthesized on free ribosomes. True or False
False - transcription factors
help the correct conformation arise.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Chaperone proteins
attaches to misfolded proteins and enables them to refold or escorts them to proteasomes for dismantling.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Ubiquitin
they stabilize partially folded regions in their correct form and prevent a protein from getting “stuck” in a useless intermediate form.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Chaperone proteins
a tunnel-like multiprotein structure where protein with more than on tag is sent.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Proteasome
They also destroy properly folded proteins that are in excess or no longer needed.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Proteasome
It causes change in the amino acid sequence, wherein it alters the attractions and repulsions between parts of the protein, contorting it.
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Mutation
infectious protein
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
Prion
The first prion disease recognized in humans was ______
CHOICES:
Ubiquitin, Prion, kuru, Mutation, Proteasome, Chaperone proteins, Signal sequences
kuru
Prions cause disease both by spreading the alternate form (infectious or mutant) and by aggregation of the protein. True or False
True
Prions are also seen in more familiar diseases, such as beta-amyloid plaques and tau protein neurofibrillary tangles in Alzheimer’s disease, and alpha-synuclein deposits in Parkinson’s disease. True or False
False - Aggregates