Gastroenterology Flashcards
Which gene and chromosome is associated with Wilson’s disease?
13q14.3 chromosome
ATP7B gene
Autosomal recessive
Carrier 1:90
How do Wilson’s Disease present?
Liver disease, coombs negative Haemolysis, tubular nephropathy, Kayser Flescher rings, Neuropsychiatric disorder
Presents typically 5 and above (need accumulation of copper for damage)
Most asymptomatic family screening
How do you diagnose Wilson’s disease?
Serum (liver) copper, Ceuroplasmin (copper carrying protein) - the lab measures the free amount of Ceuroplasm (thus, low Caeroplasmin and high copper means Wilsons), measure baseline 24 hours urinary copper excretion (and then give Pencillamine and if significant elevation -> Wilson’s disease)
ATP7 is the enzyme that attaches copper to caeroplasmin, and thus when the body isn’t able to do this , you have low levels of caeruplasmin
How do you treat Wilson’s disease?
D- Penicillamine as first line
2nd line is Trientine
(lifelong)
How does Bacillus Cereus infection present - in A) vomitting and B) diarrheal type?
Vomitting - undercoocked rice, and vomiting 1–5 hours after consumption
Diarrhea - various foods - has an 8- to 16.5-hour incubation time
How does Clostridium Perfrigens present?
Poor prepared meat and poultry - GI symptoms within 6-24 hours
Which Pathogen can act very quickly (within 30mins to cause GI symptoms)?
Staph Aureus - Foods that are frequently incriminated in staphylococcal food poisoning include meat and meat products; poultry and egg products; salads such as egg, tuna, chicken, potato, and macaroni; bakery products such as cream-filled pastries, cream pies, and chocolate eclairs; sandwich fillings; and milk and dairy products.
Heat resistant Toxin produced by Staph
Where is the APC gene and what role does it play?
It is found on chromosome 5 and mutations lead to adenomatosis polyposis coli (FAP).
It is normally a tumour suppressor gene
100% of patients will develop malignancy
What other malignancy is FAP associated with?
Hepatoblastoma
Other rare cancers; cortical dysplasia - seizure, congenital hypertrophy of retinal pigmented epithelium
What is Turcot syndrome?
Autosomal recessive + Colonic polyps + CNS tumours
What is Peutz Jeghers syndrome characterised by?
Lip freckling + gastric polyps
What is syndrome caused by germline mutations int he Serine Threonine Kinase tumour suppressor gene on chromosome 19p13.3?
Peutz Jeghers syndrome
How is Calprotectin produced?
It is present in the cytoplasm of neutrophils - it is not degraded by intestinal enzymes or bacteria
Good screening test for GI inflammation
What are GI complications fo CF?
DIOS (15%) Rectal prolapse (~20%) increased risk of GI tract tumours Fibrosing colonopathy CF associated liver disease (spectrum of disease upto cirrhosis)
3 other syndromes associated with exocrine pancreatic insufficiency?
And describe their characteristics
Shwachman-Diamond syndrome - Triad of Pancreatic insufficiency, bone marrow dysfunction and skeletal abnormalities (OP, dysplasias)
Pearson syndrome - Pancreatic fibrosis, vacoulated erythropoetic precursors, no skeletal abnormalities
Johnson-Blizzard syndrome - EPI, hypoplasia of nasal alae
How do you test for Exocrine pancreatic insufficiency?
72 hour faceal fat or faecal elastase (false positive with diarrhea)
Risk factors for TPALD?
- Prematurity and LBW
- Primary GI disease
- Lack of enteral nutrition
- Catheter related blood stream infections
- Small bowel bacterial overgrowth
Fish oil is omega- _
AND
Soy oil is omega- _
Fishoil - Omega 3 FA
Soy oil - omega 6 FA
What is the effect seen with GLP-2 analagogues (Teduglutide)?
It is a trophic hormone normally secreted by enteroendocrine cells -
It is shown to increase villous height in SBS patients and increase serum citrulline levels
SPINK 1 associated with ________
Familial pancreatitis
NOTCH 2 and JAG1 associated with _______
Allagile syndrome
SERPINA 1 associated with ________
A1AT deficiency
STK11 associated with _________
Peutz Jeghers
UGTP81 associated with ___________
Gilberts
SBDS associated with ______
Schwaman Diamond Syndrome
What is the rule of 4-4-9?
Carbohydrates = 4kcal/gram Protein = 4kcal/gram Fat = 9kcal/gram
Lactose = ______ + _______ (broken down by _______)
Glucose + Galactose (by lactase)
Breath test for carbohydrate malabsorption peaks at ______ hours. An earlier peak at 1 hour may suggests…
Breath test for carbohydrate malabsorption peaks at 2-4 hours. An earlier peak at 1 hour may suggest bacterial overgrowth or intestinal pathology
Glucose and galactose are transported by which transporter?
SGLT1 which requires Na and ATP
Fructose is transported by _______ and ________ across the basolateral membrane
Fructose is transported by GLUT2 (also transports glucose) and GLUT5
Transported via passive diffusion across the apical membrane
How does Mycophenolate mofetil work?
Prevents guanosine nucleotide synthesis preventing proliferation of T and B cells
Massive hepatic haemangiomas are associated with _________.
This is in relation to tumour expressing __________ which acts to _______
Associated with hypothyroidism.
The tumour expresses type 3 iodothyronine deiodinase which results in an increased rate of inactivation of thyroid hormone
The _ _ variant of A1AT overwhelmingly associated with liver disease
The ZZ variant
MM normal
Crigler-Najjar Syndrome 1 is due to ________
Absent enzyme that conjugates bilirubin - also UGTA1A gene
In Crigler-Najjar Syndrome 2 - the bilirubin levels are responsive to treatment with ______
Phenobarbitol because it increases the activity of the enzyme
IL-__ deficiency in VEO-IBD seen with significant perianal disease
IL-10
Which extra-manifestinal are more common in Crohns Disease than ulcerative colitis?
Erythema nodosum
Which bacteria can mimic RIF pain/appendicitis?
Yersinia enterocolitca
Also presents with erythema nodosum
Which is the investigation of choice when looking for fructose intolerance?
Serum Aldolase B enzyme measurement
What are the two chelating agents used for copper?
Pencillamine and Trientine
How do you treat hyperammonia?
Sodium Benzoate
Goat’s milk is deficient in _______
Folate
______ mutation increases the likelihood of developing Crohn’s disease
NOD2
Most common food associated with EI?
Cow’s milk
What is the recommended treatment for EI?
PPI, Elimination diet, swallowed corticosteroids
Difference between Type I and Type II and Type III Progressive familial intrahepatic cholestasis
Type I and II - normal GGT
What does bowel histopathology with Rotavirus show?
Histopathology of rotavirus-induced gastroenteritis show that the jejunal and duodenal mucosa appear to have patchy irregularities, which consists of shortening and blunting of the villi, and increased infiltration of the lamina propria with mononuclear cells.
In faecal screen:
Fat globules = ___________________
Fatty acid crystals = ________________
Fat globules = intraluminal problem e.g. failure of enzyme process or bile to suspend fats = maldigestion
Fatty acid crystals = mucosal/brush border problem (fatty acid not absorbed) = malabsorption
___________ is a form of idiopathic familial intrahepatic cholestasis associated with lymphedema of the lower extremities
Aagenaes syndrome
Affected patients usually present with episodic cholestasis with elevation of serum aminotransferase, alkaline phosphatase, and bile acid levels. Between episodes, the patients are usually asymptomatic and biochemical indices improve.
Generalized hypotonia with psychomotor retardation. Abnormal head shape and unusual facies, hepatomegaly, renal cortical cysts, stippled calcifications of the patellas and greater trochanter, and ocular abnormalities. Hepatic cells on ultrastructural examination show an absence of peroxisomes.
Which syndrome?
Zellweger (cerebrohepatorenal) syndrome
What is the pathophysiology behind neonatal haemachromatosis?
This is an alloimmune disorder with maternal antibodies directed against the fetal liver. Liver injury results in decreased hepatic hepcidin expression and thus dysregulation of placental iron flux
Affected patients present with steatorrhea, pruritus, vitamin D-deficient rickets, gradually developing cirrhosis, and low γ-glutamyl transpeptidase (GGT) levels
PFIC 1
The mutation for PFIC 1 occurs on chromosome __ and the pattern of inheritance is _______. This has an impact on _________
Chromosome 18q21 and inheritance is autosomal recessive. This affects protein FIC1 which is responsible for ATP dependent aminophospholipid flippase
What are some differences in presentation fo PFIC 1 and PFIC 2?
PFIC 2 presents with rapidly progressive cholestatic giant cell hepatitis, growth failure, pruritus.
Key differences are that PFIC 2 is rapidly progressive and PFIC 1 has impact on colon and thus you have more diarrhea
In contrast to PFIC I and PFIC 2, patients with PFIC type 3 (MDR3 disease) have _________
High levels of GGT
It is more often later-onset cholestasis, portal hypertension, minimal pruritus, intraductal and gallbladder lithiasis
How does benign recurrent intrahepatic cholestasis (BRIC) type I present?
Recurrent bouts of cholestasis, jaundice, and severe pruritus. Same mutation that involves PFIC1 but has
non-sense, frame shift, and deletional mutations cause PFIC type I; missense and split-type mutations result in BRIC type I
___________ is characterized by an elevated serum bile acid concentration, pruritus, failure to thrive, and coagulopathy
Familial hypercholanemia is characterized by an elevated serum bile acid concentration, pruritus, failure to thrive, and coagulopathy
___________ is characterized by an elevated serum bile acid concentration, pruritus, failure to thrive, and coagulopathy
Familial hypercholanemia is characterized by an elevated serum bile acid concentration, pruritus, failure to thrive, and coagulopathy