FA - Micro - Basic Bacteriology Flashcards
What is the chemical composition of peptidoglycan?
Sugar backbone with peptide side chains cross-linked by transpeptidase.
What is the function of the peptidoglycan?
Gives rigid support - Protects against osmotic pressure.
What is the function of cell wall/cell membrane?
Major surface antigen.
What is the chemical composition of the cell wall/cell membrane?
Peptidoglycan for support. Lipoteichoic acid includes TNF and IL-1.
What is the function of the outer membrane (gram neg.)?
Site of endotoxin - LPS - Major surface antigen.
What is the chemical composition of the outer membrane (gram neg.)?
- Outer leaflet = Contains LPS/LOS.
- Embedded proteins = Porins + Outer membrane proteins (OMPs).
- Inner leaflet = Phospholipids.
What is the function of the plasma membrane?
Site of oxidative and transport enzymes.
What is the chemical composition of the ribosome?
30+50S subunits.
What is the function of the periplasm?
Accumulates components exiting Gram(-), including HYDROLYTIC ENZYMES (eg beta-lactamases).
What is the chemical composition of periplasm?
Space between cytoplasmic membrane and outer membrane in Gram(-) = Peptidoglycan in the middle.
What is the function of the capsule?
Protects against phagocytosis.
What is the chemical composition of the capsule?
Polysaccharide - EXCEPT Bacillus anthracis –> D-glutamate.
What is the function of the pilus/fimbria?
Mediate adherence of bacteria to cell surface - sex pilus forms attachment between 2 bacteria during conjugation.
What is the chemical composition of pilus/fimbria?
Glycoprotein.
What is the function of the flagellum?
Motility
What is the chemical composition of the flagellum?
Protein.
What is the chemical composition of a spore?
Keratin-like coat - Dipicolinic acid - Peptidoglycan.
What is the function of the glycocalyx?
Mediates adherence to surfaces, especially foreign surfaces (e.g., indwelling catheters).
What is the chemical composition of the glycocalyx?
LOOSE NETWORK of POLYSACCHARIDE.
Mention the gram(+) cocci.
Staph + Strep
Mention the gram(-) coccus.
Neisseria + Moraxella.
Mention the gram(+) rods.
- Bacillus.
- Clostridium.
- Corynebacterium.
- Gardnerella (gram variable).
- Lactobacillus.
- Listeria.
- Mycobacteria (acid fast).
- Propionibacterium.
Mention the gram(-) enterics.
- E.coli
- Shigella
- Salmonella
- Yersinia
- Klebsiella
- Proteus
- Enterobacter
- Serratia
- Vibrio
- Campylobacter
- Helicobacter
- Pseudomonas
- Bacteroides
Mention the gram(-) respiratory bacteria.
- Haemophilus (pleiomorphic)
- Legionella (silver)
- Bordetella
Mention the gram(-) zoonotic bacteria.
- Francisella
- Brucella
- Pasteurella
- Bartonella
Mention the 2 branching filamentous bacteria.
- Actinomyces
2. Nocardia (weakly acid fast)
Mention the 2 pleiomorphic bacteria.
- Rickettsiae (Giemsa)
2. Chlamydiae (Giemsa)
Mention the 3 spirochetes.
- Treponema
- Borrelia (Giemsa)
- Leptospira
Does Mycoplasma + UREAPLASMA gram stain?
No - No cell wall - Contain sterols, which do not Gram stain.
Bacteria with unusual cell membranes/walls.
Mycoplasma –> Contain sterols and have no cell wall.
Mycobacteria –> Contain mycolic acid. High lipid content.
Mention some bacteria that do NOT gram stain well.
- Treponema
- Mycobacteria
- Mycoplasma
- Legionella pneumophila
- Rickettsia
- Chlamydia
+ Leptospira
+ Ureaplasma
+ Bartonella
+ Ehrlichia
+ Anaplasma
What is the mnemonic for the bacteria that do NOT gram stain very well?
These Microbes May Lack Real Color.
What is the problem with treponema?
Too thin to be visualized.
What do we do to visualize treponemes?
Dark-field microscopy and fluorescent antibody staining.
What is the problem with Mycobacteria?
High lipid content in cell wall detected by carbofuchsin in acid-fast stain.
How do we stain Legionella?
Silver stain.
What does Giemsa stain?
- Chlamydia
- Rickettsiae
- Borrelia
- Trypanosomes
- Plasmodium
What is the mnemonic for the bugs that Giemsa stain?
Certain Bugs Really Try my Patience.
When do we use PAS (periodic acid-Schiff)?
Stains glycogen - mucopolysaccharides - used to diagnose Whipple disease –> Trophyrema Whipplei.
When do we use Ziehl-Nielsen (carbol fuchsin)?
- Acid-fast organisms - Nocardia, Mycobacterium (stains mycolic acid in cell wall).
- Protozoa - CRYPTOSPORIDIUM OOCYSTS.
When do we use India ink?
C.neoformans - mucicarmine can also be used to stain thick polysaccharide capsule RED.
When do we use silver stain?
- Fungi (PCP + COCCIDIOIDES)
- Legionella
- H.pylori
What is the medium used for isolation of H.influenza?
Chocolate agar with V(NAD+) + X (hematin).
What is the medium used for Neisseria isolation?
Thayer-Martin (or VPN):
V –> Vancomycin –> Kills Gram(+).
P –> Polymyxin (TMP + Colistin) –> Kills Gram(-) except Neisseria.
N –> Nystatin –> Kills Fungi.
What is the medium used for B.pertussis?
- Bordet-Gengou (potato) agar (Bordet for Bordetella).
2. Regan-Lowe medium –> Charcoal + Blood + Antibiotic.
What is the medium used for C.diphtheriae isolation?
- Tellurite agar.
2. Loeffler medium.
What is the medium used for M.tuberculosis isolation?
Lowenstein-Jensen agar.
What is the medium for M.pneumoniae?
Eaton agar - Requires cholesterol.
What are the media used for Lactose-fermenting enterics’ isolation?
MacConkey agar –> Pink colonies - Fermentation produces acid, turning colony pink.
What is the medium used for Legionella?
Charcoal yeast extract agar buffered with cysteine + iron.
What is the medium for fungi?
Sabouraud agar - “Sab’s is a Fun guy!”
Mention some obligate aerobes.
- Nocardia
- P.aeruginosa
- M.tuberculosis
Use and O2-dependent system to generate ATP.
Mention the main obligate anaerobes.
- Clostridium
- Bacteroides
- Actinomyces
- Fusobacterium.
What are the main features of obligate anaerobes?
- Lack catalase and SOD
- Susceptible to oxidative damage.
- Generally foul-smelling (short-chain fatty acids).
- Difficult to culture.
- Produce GAS in tissue (CO2, H2)
Are aminoglycosides effective against obligate anaerobes?
NO - Aminoglycosides require O2 to enter into bacterial cell.