EXERCISE 3 - 5 Flashcards

1
Q
  • Process of separating substances in a complex mixture by their different affinities to an adsorbent
  • One of the most useful methods of separating the components of minute amount of mixtures
  • Discovery with plant samples
  • Commonly used for analyzing mixtures of colored chemicals
A

CHROMATOGRAPHY

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2
Q

who invented chromatography

A

MIKHAIL SEMYONOVICH TSVET

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3
Q

chroma means

A

color

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4
Q

graphein means

A

to write

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5
Q
  • Either a liquid or solid that is fixed in place during the process
  • Usually a high-quality filter paper, or an adsorbent
A

STATIONARY PHASE

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6
Q
  • Either liquid or gas which moves the samples through the stationary phase during the process
  • Solvent or a mixture of solvents
A

MOBILE PHASE

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7
Q

CHROMATOGRAPHY

forces of attraction for non-polar

A

weak VAN DER WAALS

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8
Q

CHROMATOGRAPHY

forces of attraction for polar

A

dipole-dipole
hydrogen bonding

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9
Q

CHROMATOGRAPHY

Polar compounds adsorb strongly on what phase

A

STATIONARY PHASE

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10
Q

CHROMATOGRAPHY

Non-polar compounds have higher affinity with what phase

A

MOBILE PHASE

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11
Q

CHROMATOGRAPHY

The extent of separation is measured by

A

RETENTION FACTOR
Rf value

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12
Q

This value depends on the relative solubility and adsorptive properties of the components of the sample

A

RETENTION FACTOR
Rf value

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13
Q

Rf value formula

A

distance travelled by the substance / distance travelled by the solvent

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14
Q

Largely depends on adhesion and cohesion forces which allows the mobile phase to move along the stationary phase due to surface tension

A

PAPER CHROMATOGRAPHY

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15
Q

PAPER CHROMATOGRAPHY

It is important that the solvent level is ____ the spots with samples

A

BELOW

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16
Q

in paper chromatography, what should be the shape of the paper

A

COILED / FORMED INTO CYLINDER

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17
Q

why does the container needs to be covered during paper chromatography

A

to prevent volatilization

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18
Q

PAPER CHROMATOGRAPHY

solution used as spray to allow the visualization of spots

A

NINHYDRIN

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19
Q

ninhydrin solution reacts with amino acids giving colored compounds known as

A

RUHEMANN’S PURPLE

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20
Q

Building blocks of proteins

A

AMINO ACIDS

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21
Q

Amino acids may react as an acid or a base

A

AMPHOTERIC

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22
Q

The pH at which the amino acid exists in its zwitterionic form is called as

A

ISOELECTRIC pH

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23
Q
  • General test in nature
  • Used to detect the presence of peptide bond
  • Complexes turn the solution from blue to purple
  • The deeper the purple color, the higher is the number of the peptide-cupric ion
  • Negative for single amino acids
A

BIURET TEST

24
Q

BIURET TEST

In the presence of an ____ solution, the blue-colored cupric ions form complexes with peptide bonds

25
* The **general test for amino acids** * Used to **detect** the **presence** of **amine group**, which includes α-amino acids * Positive results are **not exclusive** to proteins or amino acids * Amino acid undergoes **oxidative deamination**
NINHYDRIN TEST
26
in **ninhydrin test**, Amino acid undergoes ___
oxidative deamination
27
# NINHYDRIN TEST **Proline** produces what complex
YELLOW
28
# NINHYDRIN TEST **Asparagine** produces what complex
BROWN
29
* Used to **detect** the **presence** of **aromatic amino acids**—the presence of **benzene** (Tyr, Trp, and Phe) * Aromatic benzene undergoes **nitration** (+NO2) upon reacting with conc. Nitric acid produces **yellow color** in the solution * Upon addition of an **alkali**, these nitro derivative salts produce an **orange color** in solution due to ionization of the phenolic group
XANTHROPOTEIC TEST
30
# XANTHOPROTEIC TEST **Aromatic benzene** undergoes ____ upon reacting with **conc. Nitric acid**
NITRATION
31
# XANTHORPOTEIC TEST Aromatic benzene + conc. Nitric acid **result**
YELLOW SOLN
32
# XANTHOPROTEIC TEST Aromatic benzene + conc. Nitric acid + **alkali**
ORANGE SOLN
33
* Used to **detect** the **presence** of **phenolic amino acid**—**tyrosine** * Tyrosine reacts with mercury and mercuric nitrate to form **red-colored complex**
MILLON'S TEST
34
# MILLON'S TEST tyrosine + mercury & mercuric nitrate
RED-COLORED COMPLEX
35
* Used to **detect** the **presence** of the **guanidino group** found in the amino acid **arginine** * Arginine reacts with α-naphthol in ethanol and an oxidizing agent (e.g. sodium hypobromite, sodium hypochlorite) to give a **red-colored** product
SAKAGUCHI TEST
36
# SAKAGUCHI TEST arginine + a-naphthol + oxidizing agent
RED COLORED PRODUCT
37
* Used to **detect** the **presence** of **indole-containing** amino acid—**tryptophan** * The **indole group** of tryptophan **reacts** with **glyoxylic acid** in the presence of sulfuric acid to give a **purple-colored complex**
HOPKIN'S-COLE TEST
38
prepared from **glacial acetic acid** being **exposed** to **sunlight**
GLYOXYLIC ACID
39
* Used to detect **sulfur-containing** amino acid—**cysteine** * When **cysteine** is **heated** with **sodium hydroxide**, it will **yield sodium sulfide**, this chemical reaction converts organic sulfur into an inorganic one * Sodium sulfide is then reacted with Lead (II) Acetate, producing **black precipitate** in the solution
LEAD ACETATE TEST
40
# LEAD ACETATE TEST cysteine heated w/ NaOH → NaS NaS + Lead (II) acetate will produce
BLACK PPT
41
are **polymers** of **monomers** of **amino acids**
PROTEINS
42
* **Helper proteins** that provide **favorable conditions** for protein **folding** to **take place** * **Clump around** the forming protein and **prevent** other polypeptide chains from **aggregating** * Once the target protein **folds**, these proteins **disassociate**
CHAPERONE PROTEINS
43
* Any process that **temporarily** or **permanently** changes the **protein conformation** which results in **loss of protein activity** and **function** * **Destruction** of the **quaternary**, **tertiary**, and **secondary** levels of the structure of proteins
PROTEIN DENATURATION
44
# PROTEIN DENATURATION **Destruction** of the **primary** level of protein structure
HYDROLYSIS
45
Denaturing a protein is occasionally ____
IIREVERSIBLE
46
**visualizes** the process of protein denaturation
PAPER CLIP ANALOGY
47
# PROTEIN DENATURATION * Causes the atoms to **vibrate more rapidly** by kinetic energy * **Disruption** of **relatively weak forces** such as **H-bonds** and **hydrophobic interactions** * **mostly** employed technique in **sterilization** which **destroys enzymes** in bacteria
HEAT
48
# PROTEIN DENATURATION are often **charges** and **can form ionic bonds** with a **group of opposite charge**
R GROUPS in amino acids
49
# PROTEIN DENATURATION Chemicals like **ethanol** can form ____ with protein molecules which **disrupts** the **intramolecular H-bonds** of the **protein itself**
H BONDS
50
used as a **disinfectant** because it **denatures proteins of bacteria** (can penetrate the bacterial cell wall)
70% ETHANOL
51
**coagulates proteins** at the **cell wall surface**, forming a **crust** that **prevents** the **alcohol** from **penetrating bacterial cell**
95% ETHANOL
52
# PROTEIN DENATURATION can form **strong groups** with **disulfide groups** of proteins
MERCURY II LEAD II SILVER
53
# PROTEIN DENATURATION cause the protein to **precipitate** out of the solution as **insoluble metal-protein salt**
DISRUPTED DISULFIDE BRIDGES & SALT LINKAGES
54
# PROTEIN DENATURATION are used as **antidotes** for **heavy metal poisoning**
HIGH PROTEIN SUBSTANCES | egg whites, milk
55
# EGG ALBUMIN provides **nourishment** and **binds digestive enzymes**; approximately **54%** of the protein content
OVALBUMIN
56
# EGG ALBUMIN **most heat-labile**; approximately **12%** of the protein content
OVOTRANSFERRIN