Enzymes Flashcards
Conjugated proteins
Catalyst/Speed up or hasten biochemical reaction
Very efficient and effective
Highly specific
Enzymes
Enzymes accelerate chemical reactions by decreasing
the energy of activation of the reaction
Protein portion of enzyme
Apoenzyme
Non protein portion of enzyme
inorganic e.g. metal ions -> co factors
organic e.g. NAD, FAD, FMN -> coenzyme
Inorganic non protein portion of enzyme
Cofactors
Organic non-protein portions
Usually vitamins
Coenzyme
Apoenzyme (protein) + Cofactor/Coenzyme (nonprotein)
Holoenzyme
Amount of energy required to produce a transition state and bring about a reaction
Energy of activation (Ea)
Enzymes that catalyze oxidations and reductions
Oxidoreductases
Enzymes that catalyze transfer of moieties such as glycosyl, methyl, or phosphoryl groups
Transferases
Enzymes that catalyze hydrolytic cleavage of C-C, C-O, and other covalent bonds
Hydrolases
Enzymes that catalyze CLEAVAGE of C-C, C-O and other COVALENT bonds by
Atom elimination
Generation of double bonds
Lyases
Enzymes that catalyze GEOMETRIC or STRUCTURAL changes within a molecule
Isomerases
What is the action of glutaminase enzyme?
Hydrolytic cleavage
Hydrolase
Catalyzes glutamine to glutamate
Two sites of enzymes
Active site
Substrate recognition site
The substrate can bind to the enzyme to form an
Enzyme-Substrate Complex
Substrate binds to the enzyme at the
active site
When the reaction is complete the products are released and the enzyme can be used again
The result:
reaction product
Substrate + Active Site = ES Complex
Substrate perfectly fits on active site
Rigid Template Model
(Emil Fischer)
Lock and Key Model
As substrate binds, enzyme undergoes a confirmational change that repositions amino acids in the active site and increases interactions with the substrate
Induced Fit Model
(Daniel Koshland)
Flexible Fit Model
Active site assumes shapes that are complementary to that of the substrate only after the substrate is bound
Induced Fit Model
(Daniel Koshland)
Flexible Model
Is the velocity approached at a saturating concentration of the substrate
Vmax
Is the concentration of the substrate required to produce 1/2 Vmax
Km
Km =
Km = 1/2 Vmax