Biotechnology Flashcards

1
Q

what is biotechnology?

A

use of biological systems to generate useful products

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2
Q

examples of areas where biotechnology used / can be used?

A
  • transgenic animals
  • gene editing
  • multigene cassettes
  • tissue regeneration
  • protein production + protein engineering
  • gene therapy
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3
Q

what is exogenous gene expression?

A

expression of non native genes in organism

expression via plasmids/integration into genome

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4
Q

give examples of expression vectors

A
  • F1 phage origin: viral packaging
  • AMP resistance: antibiotic resistance
  • ori : origin/replicaion
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5
Q

when cloning any gene, what do you need?

A

restriction sites at ends of gene

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6
Q

cloning process

A
  • cut both dna mol with same RE
  • gel purify 2 fragments - gel electrophoresis
  • join fragments using dna ligase
  • verify cloning via gel electrophoresis
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7
Q

why do you usually use different RE?

A

to stop re-ligation + to preserve orientation of insert

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8
Q

gel electrophoresis

A

used to verify sizes and separate/purify fragments

purified product used for transforming cell

product can = digested with REs to verify that ligation has worked

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9
Q

what do eukaryotes use for strong expression?

A

viral promoters (CMV/SV40)

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10
Q

what are more specific promoters used for?

A

lower expression levels

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11
Q

for most biotech processes, what is used?

A

e.coli

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12
Q

mammalian cell expression system

A
  • correctly folded + fully post-transcriptionally modified
  • transported to culture media

available for purification

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13
Q

bacterial/yeast cell expression host

A
  • intracellular expression
  • soluble/insoluble
  • cell breakage needed

available for purification and modification if needed

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14
Q

give an example of a recombinant vector?

A

lac operon

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15
Q

what is the lac operon used for?

A

control elements for heterologous protein expression

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16
Q

what can be improved with the promoter-expression-cassette

A

needs = more tightly controlled

as is prone to leakage

leaky expression leads to plasmid instability - plasmid loss

17
Q

T7 RNA polymerase

A

taken from bacteriophage T7

18
Q

state the cassette location, promoter, operator, and whether its induced/un induced for the LacI cassette?

A
  • e coli chromosome
  • rna polymerase
  • operator unknown
  • un-induced constitutive ON
  • induced constitutive ON
19
Q

state the cassette location, promoter, operator, and whether its induced/un induced for the T7 polymerase?

A
  • e coli chromosome
  • rna polyermase
  • operator -> lacI controlled
  • uninduced constitutive OFF
  • induced constitutive ON
20
Q

state the cassette location, promoter, operator, and whether its induced/un induced for the gene of interest?

A
  • plasmid vector
  • t7 polymerase
  • lacI controlled
  • uninduced constitutive OFF
  • induced constitutive ON
21
Q

what do CHO cells need in their medium for growth?

A

proline

22
Q

CMV promoter

A
  • presence of SV40 replication —> high dna replication levels in SV40 replication permissive cells
23
Q

what is CMV?

A

herpes virus that infects most cell types and establishes latency in leukocytes

24
Q

the enhancer sequence is…

A

primary control point

25
Q

what are the advantages of the CMV promoter?

A
  • high levels of gene expression in differentiated cells (CHO)
  • strong preference of CMV enhancer sequence for cellular signals + transcription factors
  • enhancer = modulated by wide variety of chemical/biological mediators
  • transient expression = strong
26
Q

what are the disadvantages of the CMV promoter?

A
  • low level of expression in un differentiated cell types
  • strong preference pf CMV enhance sequence for cellular signals + transcription factors
  • enhancer = strongly unregulated by serum —> there is batch-batch variability
  • stable integration into genome —> down -regulation of promoter
27
Q

some inducible systems used to varying effects are …

A
  • temp shift responsive elements
  • heavy metal induction
  • steroid responsive promoters - induction with glucocorticoids
28
Q

the major disadvantage of the expression systems is…

A
  • off target effects due to generic induction strategies

- high basal expression level leads to negative regulation upon induction through stress response mechanisms