biochem exam 3 genes and chromosomes Flashcards
Information pathway
in which the genetic information is stored as nucleotide sequence and is maintained and expressed
gene
is a chromosomal segment that encodes for a single polypeptide chain, RNA molecule serve as a regulatory function
genome
contains the total genetic information of a cell, organism or a virus
chromosome
is a compact strand of DNA that is encoded with genes it has chromatin formed during nuclear division
chromatin
DNA complex with histones and other proteins and is typically dispersed throughout the nucleus during interphase
transcription
one strand of the double stranded DNA is serve as a template for the mRNA for transcription
translation
the triplets of nucleotides in the mRNA bind to the complementary triplets in the tRNA
-The tRNA it carries the specific Amino acids needed for protein synthesis
three nucleotides
codon
nucleoid
in bacteria the negative supercoiling of the DNA compaction
-the nucleoid exist in the cytosol
Craig venter
suggest that the living organism could get less than 400 genes
viral genomic DNA
associated with capsid
prokaryotic DNA
associated with nucleoid
eukaryote DNA
is organize proteins into a complex called chromatin
mature transcript
introns are removed after transcription
exons are joined together
transposons
sequence called transposons the can move around within the genome of a single cell
-account for 50% of the human gemone
SSRs
Simple Sequence Repeat
-Also called satellite because when fragment and centrifuged the DNA separates into discrete satellite\
-It has capsomeres and telomeres
centromere
is a region that hold the two daughter chromosomes together
-contains each equally divided set of chromosome sets to daughter cell
Telomere
it caps the ends of each chromosome
-prevent DNA from unraveling
-Is added by enzyme telomerase
Hayflick limit
52
is the number of the human genome can divide before loosing ability to divide
-in each replication the telomere shortens
normal B form
relaxed DNA
linear DNA
is underwound and has proteins to prevent the DNA from rotating
linking number
describes supercoiling
how many base pairs normal vs how many base pairs per turn
topoisomers
is DNA that only differs in the linking number
has the same number of base pairs but only differ on the degree of supercoiling
topoisomerases
enzymes that are required for DNA unwinding and rewinding and are required during DNA transcription and replication
Type I Topoisomerase I and III topoisomerases
make a transient cut in one strand of the DNA and changes the lk increase by 1
Type II topoisomerases
make a transient cut in both DNA strand and changes the lk by 2
-Is called DNA gyrase
-Decreases the LK
-Uses ATP and double stranded breaks
Coumarins (novobiocin and coumermacycin
inhibit topo II from binding to ATP
nucleosomes
DNA and protein are packed into discrete units
histones
DNA associated tightly with proteins called histones
-the amino terminal stick out
-54 bp
-binding site of histones is A-T rich regions
SMC
structural maitenance of chromosomes
cohesins
link sister chromatids
condensin
help chromosomes to condense create positive super coil