Basic Chemical Context of Life notes Flashcards
organisms are made up of ____
matter
matter
anything that takes up space and mass
electronegativity
ability of an atom to attract electrons
EN between two atoms directly affects what type of bond it forms
Ionic bond
the complete transfer of electrons from one atom to another
more electronegative atom pulls an electron from the less electronegative atom
results in a difference in charge between the atoms
covalent bond
sharing of electrons between atoms with similar electronegativities
single, double, or triple
nonpolar covalent bond
equal sharing of electrons
no atom has a greater pull of electrons than the other - identical electronegativities
polar covalent bond
unequal sharing of electrons
leads to formation of a dipole
hydrogen bond
a weak bond that can form between molecules that have a hydrogen atom attached to a highly electronegative atom (F, O, or N) that is attracted to a negative charge on another atom
- can be within a molecule (intramolecular) or between molecules (intermolecular)
- important bond in water and DNA
Van der Waals interactions
are a weak attraction rather than a true chemical bond
due to different distribution of electrons
- weaker and more transient than hydrogen bonds
- interaction gets stronger the larger the molecule is
- happens as electrons orbit the atom and there is a change is distribution
water
- polar molecule
- excellent solvent - the dipoles of H2O break up polar or charged ionic molecules
- high heat capacity - a lot of heat has to be added before the temperature changes (good thing! means water is temperature stable)
- more dense as a liquid than a solid
- ice floats - water expands as it freezes and becomes less dense than liquid form
- cohesion/surface tension - water is attracted to like substances due to its H bonds. this strong cohesion between water molecules produces a high surface tension
- adhesion - water is also attracted to unlike substances
Hydroxyl (OH)
polar and hydrophilic
carboxyl (COOH)
polar, hydrophilic, weak acid
amino (NH2)
polar, hydrophilic, weak base
phosphate
polar, hydrophilic, acid
carbonyl
- aldehyde
- ketone
polar and hydrophilic
methyl (CH3)
nonpolar and hydrophobic
monosaccharide
singular sugar molecule
(glucose or fructose)
alpha - OH down
beta - OH up
disaccharide
two sugar molecules joined by glycosidic linkage
(sucrose, lactose, maltose)
polysaccharide
series of connected monosaccharides; polymer
(glucose + fructose)
(glucose + galactose)
( glucose + glucose)
starch
a polymer of alpha-glucose molecules
- store energy in plant cells
glycogen
a polymer of alpha-glucose molecules
- store energy in animal cells
cellulose
a polymer of beta-glucose
- structural molecules for walls of plant cells and wood
chitin
a polymer similar to cellulose, except each beta-glucose group has a nitrogen containing group attached to the ring
- structural molecule in fungal cells as well as insect exoskeletons
lipids
hydrophobic molecules that function in insulation, energy storage, make up structural components like cholesterol and phospholipids in membranes, and participate in endocrine signaling