Amino Acids and Proteins Flashcards

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1
Q

What are the biological roles of proteins?

A

Transport, storage, enzyme catalysts, motion, skeletal support, immune protection, nerve impulse transmission, control of metabolism

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2
Q

What does a protein consist of?

A

either single or several polypeptide chains

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3
Q

what is an unbranched polypeptide chain?

A

polymer of amino acids linked by a peptide bond

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4
Q

what is the smallest functional protein?

A

tripeptide called thyrotropin-releasing hormone

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5
Q

how many amino acids are there?

A

20

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6
Q

what are the side chains on the amino acids?

A

acidic COOH, basic NH2, H and R

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7
Q

where do L-amino acids occur?

A

proteins

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8
Q

where do D-amino acids occur?

A

bacterial cell walls

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9
Q

what is electronegativity

A

the power of an atom to attract electrons towards itself

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10
Q

What makes R groups polar?

A

presence at pH 7 of full +ve or -ve charge in R group or partial charges in permanent dipole bonds in non-ionisable R groups

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11
Q

What makes R groups nonpolar ?

A

many nonpolar C-C and C-H bonds

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12
Q

Give an example of a nonpolar amino acid

A

alanine

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13
Q

Give an example of a polar amino acid

A

lysine

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14
Q

what does hydroxyproline do?

A

the OH group stabilises collagen fibre

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15
Q

what does Y-carboxyglutamate do?

A

carboxylation of Glu in prothromnin

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16
Q

what does O-phospherine do?

A

phosphorlyation of serine is the most common form of regulation of protein activity

17
Q

what is primary structure?

A

amino acid sequence

18
Q

what is secondary structure?

A

arrangement in space of amino acids close to one another in a polypeptide chain

19
Q

what is tertiary structure?

A

3D structure of all the atoms in a single polypeptide chain. interactions between R groups fold protein into a compact 3D shape

20
Q

what is quaternary structure?

A

3D interaction of protein subunits in proteins with more than one polypeptide chain