amino acid Flashcards

1
Q

four main functions of proteins

A

catalysis, transport, structure, and motion (myosin and actin)

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2
Q

__ ___ are the building blocks of proteins

A

amino acids

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3
Q

basic anatomy of amino acid includes

A

central carbon, an amino group, carboxyl group and r side chain

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4
Q

most amino acids are chiral in nature which means

A

they have 4 unique attachments on central carbon

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5
Q

eukaryotes use only ___ isomer of amino acids

A

L

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6
Q

we only use L isomer because

A

environment contains only L amino acids

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7
Q

___ is the only non chiral

A

glycine

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8
Q

first carbon with greek letter alpha will be

A

chiral carbon

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9
Q

what are the 5 R group classifications of amino acids

A

nonpolar (7), aromatic (3), polar uncharged(5), pos. charged (3), neg. charged (2)

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10
Q

what are the amino acids with nonpolar side chains

A

G, A, P, V, L , I, M

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11
Q

what are the 3 aromatic amino acids

A

F, Y, W

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12
Q

G

A

GLY, glycine

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13
Q

A

A

Ala

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14
Q

P

A

pro

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15
Q

v

A

val

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16
Q

L

A

leu

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17
Q

I

A

ile

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18
Q

M

A

met

19
Q

F

A

phe

20
Q

Y

A

tyr

21
Q

W

A

trp (tryptophan)

22
Q

____ and ___ are the strongest chromophores

A

tryptophan and tyrosine

23
Q

the aromatic R groups are the only ones which can do what

A

absorb light

24
Q

polar uncharged amino acids

A

S, T, C, N, Q

25
Q

S

A

ser

26
Q

T

A

thr (threonine)

27
Q

C

A

cys

28
Q

N

A

Asn (asparagine)

29
Q

positively charged R groups

A

K, R, H

29
Q

Q

A

Gln (glutamine)

30
Q

cystein has___ group, can form disulfide bondsn

A

thiole

31
Q

K

A

lys

32
Q

R

A

arg (arginine)

33
Q

H

A

histidine

34
Q

negatively charged R groups

A

D, E

35
Q

D

A

asp (aspartate)

36
Q

E

A

GLU (glutamate)

37
Q

when pH < pKa

A

fully protonated

38
Q

when pH = pKa

A

half protonated/ half deprotonated

39
Q

when pH > pKa

A

fully deprotonated

40
Q

at neutral pH the ___ group is deprotonated but ____ is protonated (0)

A

carboxyl, amino

41
Q

at acidic pH the carboxyl group is _____ but amino is _____

A

protonated, cationic (+1)

42
Q
A