6.1.1 Cellular control Flashcards

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1
Q

substitution mutation features

A

also known as point mutation
one base pair replaces another
same number of amino acids results

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2
Q

types of mutation and effects

A
silent mutations (no effect on protein)
missense mutations (usually has effect on protein)
nonsense mutations (usually had a large effect on protein)
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3
Q

silent mutations

A

change in base pair will still code for same amino acid = same protein = no effect
(most AA coded for by more than one DNA codon)

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4
Q

why genetic code is non-overlapping

A

makes sure genes are read “in-frame” by start and stop codons
no codon codes for more than one amino acid

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5
Q

why genetic code is redundant / degenerate

A

more than one codon codes for the same amino acid

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6
Q

missense mutation features

A

change in base pair causes change in amino acid
= change in primary and tertiary structure of protein
= change in shape and function
e.g. sickle cell anaemia

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7
Q

nonsense mutation features

A

change in base pair causes it to become a stop codon
= early termination of polypeptide chain
= change in shape/function of protein
e.g. cystic fibrosis

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8
Q

insertion and deletion mutation features

A

indel mutations
extra base pairs inserted / some deleted
results in number of base pairs not being in multiples of 3
causes frameshift
alters all subsequent DNA codons
= large change in primary and tertiary structure of protein
= large change in shape and function
if 3 bases are inserted/deleted no frame shift occurs (only 1 less/more amino acid)

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9
Q

lac operon in prokaryotes

A

lacI transcripted and translated to synthesise lacI repressor protein
lacI repressor protein binds to operator region on bacterial DNA, preventing expression of lacZ and lacY genes
when all glucose used up and lactose present
lactose binds to repressor protein
alters its shape and prevents it binding to operator
allows RNA polymerase to bind to promoter region
lacZ and lacY genes undergo transcription
beta-galactosidase and lactose permease are synthesised
thus, lactose induces the enzymes needed to break it down

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10
Q

what gene expresses beta-galactosidase

A

lacZ

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11
Q

what gene expresses lactose permease

A

lacY

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12
Q

lactose permease function

A

embedded into plasma membrane
acts as channel protein for lactose
greater rate of lactose entering the cell

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13
Q

beta-galactosidase function

A

breaks down lactose into glucose and galactose

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14
Q

control of gene expression at transcriptional level in eukaryotes method

A

certain genes only expressed in certain cells
transcription factors (proteins) control which genes are switched on or off
transcription factors bind to specific promoter regions of DNA for gene they control
helps or prevents RNA polymerase from binding and transcribing gene

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15
Q

how primary mRNA is spliced method

A

both intron and exons are transcribed to produce primary mRNA
primary mRNA binds to endonuclease enzyme (forms spliceosome)
primary mRNA spliced by endonuclease enzyme to remove introns
exons join together to produce mature mRNA, leaves cell and translated

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16
Q

why introns exist

A

some primary mRNA spliced in different ways - allows it to code for more than 1 protein

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17
Q

do prokaryotes have introns

A

no

18
Q

control of gene expression at post-transcriptional level method

A

protein has been made
signalling molecule (first messenger) binds to receptor on cell surface membrane
causes G-protein to activate adenyl cyclase
converts ATP to cAMP (secondary messenger) which activates the protein
can then involve adding functional groups e.g. phosphorylation of many proteins
modified proteins enters nucleus and acts as transcription factor to regulate transcription

19
Q

spliceosome definition

A

structure formed when primary mRNA binds to endonuclease enzyme

20
Q

regulatory gene definition

A

codes for repressor protein/transcription factor that switches (structural/another) gene on/off

21
Q

structural gene definiton

A

codes for protein/polypeptide

22
Q

relationship between regulatory gene and structural gene

A

regulatory gene controls expression of structural gene

23
Q

homeobox gene definition

A

homeotic gene containing 180 base-pair sequence that codes for a 60-amino acid sequence called homeodomain sequence (transcription factors)

24
Q

homeotic genes function

A

control morphogenesis (anatomical development) of organisms

25
Q

homeodomain sequence function

A

shape specific to part of enhancer region on DNA so it binds to DNA to initiate/stop transcription to switch genes on/off
controls development of body plan
60 amino acids long

26
Q

master gene definition

A

control expression (switch on/off) of many other genes

27
Q

why homeobox genes are highly conserved

A

found in all plant, animal and fungi species from a common ancestor
very similar in all organisms
very few mutations in genes as they would largely affect body plans of organisms
mutations selected against as they would have killed organisms

28
Q

Hox genes function

A

homoebox genes found only in animals
control formation of anatomical features in correct locations of body plan
expressed in embyronic development one by one along anterior-posterior axis
causes development of particular body parts in this particular order

29
Q

why different classes of animals develop in similarly as segments

A

Hox genes similar across different classes of animals

Hox genes switched on in segments, causing development in segments

30
Q

Hox genes between different animals

A

number and arrangement of Hox genes varies among different animals
due to evolution, Hox clusters have duplicated, leading to greater complexity in body structure
tetrapods (e.g. humans) have 4 similar Hox genes

31
Q

characteristics scientists want for animals to use in experiments

A
cheap to buy and keep
reproduce quickly
small
large cells
readily available
32
Q

what information can be learnt from model organisms applied to humans

A
all in same kingdom
shared ancestors
similar cells
shared genes
similar embryonic development/ homeobox/Hox genes
33
Q

apoptosis definition

A

programmed cell death

34
Q

necrosis definition

A

cell death due to trauma/disease

35
Q

apoptosis method

A

triggered by transcription factors made by Hox genes causing:
cytoskeleton broken down by enzymes
cell shinks, plasma membrane forms blebs (small protrusions), chromatin condenses
DNA breaks up, nuclear envelope breaks down into fragments
blebs form vesicles containing organelles
vesicles engulfed and digested by phagocytes, preventing damage to other cells by dead cells’ contents

36
Q

controlling apoptosis

A

genes that regulate cell cycle and apoptosis able to respond to internal and external cell stimuli e.g. stress
cell-signalling molecules released (e.g. cytokines, hormones, nitric oxide)

37
Q

how nitric oxide causes apoptosis

A

makes inner membrane of mitochondria more permeable to hydrogen ions, dissipating proton gradient (reduces ATP production)
proteins released into cytoplasm, bind to apoptosis inhibitor proteins, causing apoptosis

38
Q

how mitosis and apoptosis control body development

A

mitosis causes growth in zygote
cells destroyed by apoptosis when cells reach Hayflick limit (divide ~50 times)
rate of mitosis and apoptosis should be equal otherwise tumours would form or tissues would degenerate (e.g. Alzheimers)
apoptosis vital in body development (e.g. separation of digits, loss of vestigial tail in humans)

39
Q

Hayflick limit

A

cells should only divide around 50 times

40
Q

why cells are broken down by apoptosis instead of hydrolytic enzymes

A

hydrolytic enzymes could destroy neighbouring cells