Unit 4 day 3 Flashcards

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1
Q

What is holoenzyme?

A

It is composed of the core polymerase and the sigma factor

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2
Q

What is a transcriptional unit?

A

It extends from a promoter sequence to a terminator sequence of the DNA molecule.

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3
Q

What is the promoter composed of?

A

It is composed of a DNA sequence to which RNA polymerase binds. It is also composed of the start site (+1).

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4
Q

What is start site (+1)?

A

It is the first base to be transcribed into RNA

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5
Q

When does transcription bubble occur?

A

During elongation during transcription

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6
Q

What is the transcription bubble?

A

It is what moves down the DNA template strand at a rate of 50 nucleotides per second.

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7
Q

What is the transcription bubble made of?

A
  1. RNA polymerase
  2. DNA template strand
  3. Growing RNA transcript
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8
Q

What is known about RNA regarding length of life?

A

It does not last very long.

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9
Q

When does transcription stop?

A

When the transcription bubble encounters a terminator DNA sequence which is often with a series of A-T base pairs.

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10
Q

In what does transcription and translation often occur at the same time?

A

In prokaryotes.

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11
Q

How do prokaryotes replicate regarding time/speed?

A

They replicate really quick

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12
Q

What can embryonic stem cells do?

A

They can take any shape/function

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13
Q

What does methyl groups do?

A

They silence the genes.

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14
Q

What does acetyl groups do?

A

They open the DNA up so that the genes can be seen and activated.

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15
Q

What is LAC operon?

A

It is widely used in molecular biology.

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16
Q

What are snRNAs do?

A

They are within the spliceosome recognized and remove the introns and splice the exons together to produce the final mRNA transcript.

17
Q

What are required for mRNA modifications?

A
  1. Addition of 5’ cap
  2. Addition of 3’ poly-A tail
  3. Removal of non-coding sequence
18
Q

What does Exon do?

A

They code for protein

19
Q

What is alternate splicing?

A

It is splice exons to make several proteins from 1 gene

20
Q

Regarding Translation what is initiation?

A

mRNA, tRNA and rRNA come together at a stop codon

21
Q

Regarding translation what is elongation?

A

tRNAs bring AA to the ribosome to build polypeptide

22
Q

Regarding translation what is termination?

A

Ribosome encounters a stop codon and releases polypeptide.

23
Q

What does aminoacyl- tRNA Synthetases do?

A

It adds AA to the acceptor arm of each tRNA

24
Q

What does the anticodon loop of tRNA contain?

A

The nucleotide sequences complementary to mRNA codons

25
Q

What are the 3 binding sites of tRNA?

A
  1. A site
  2. P site
  3. E site
26
Q

What is the order of the tRNA binding sites?

A

EPA

27
Q

What are the three primary functions of ribosomes?

A
  1. Recognizing the 5’ CAP and binding to the appropriate start site.
  2. Decode the mRNA
  3. Form peptide bonds between AAs using the enzyme peptidyl transferase