Unit 4 Flashcards
Transcription
DNA —> RNA
Translation
RNA —> protein (chain of amino acid)
Transcription def
A complementary sing strand of mRNA is copied from part of the DNA in the nucleus
RNA polymerase
An enzyme
Unwinds DNA strand
“Reads” one strand of DNA bases and makes the RNA strand
mRNa leaves and DNA strands will coil back up
RNA: sugar ribose
Instead of deoxyribose
RNA: single-stranded
Instead of double stranded
RNA: contains uracil
In place of thymine
RNA contains
Adenine, cytosine, guanine uracil (not thymine)
Comparison of FNA and RNA
Sugar: DNA RNA
Messenger RNA (mRNA)
Carries copies of instructions, for the assembly of amino acids into proteins, from DNA to the ribosome (serve as “messenger”)
Three main types of RNA
Messenger RNA (mRNA)
Ribosmomal RNA(rRNA)
Transfer RNA “(tRNA)
*mRNA editing
Cutting and splicing mRNA before it leaves the nucleus
*Introns (intruders)
“Junk DNA” that doesn’t code for proteins are cut out
*Exons
“Good DNA” that code for proteins stay and are expressed
Can be spliced together in different sequences to produce different mRNA’s = different proteins
Introns are
Removed and exons are spliced together
Edited mRNA is sent out of
Nucleus to ribosome
*Ribosomal RNA (rRNA)
Makes up the major part of ribosomes, which is where proteins are made
*Transfer RNA (tRNA)
Transfer (carries) amino acids to ribosomes as specified by codons in the mRNA
How the code is read:
Every 3 bases on mRNA represents a code for an amino acid = codon
Amino acids are abbreviated most times by using the first 3 letters of the amino acids name
Met = methonine
Leu=leucine
tRNA have a order and a sequence also read in
3’ to 5’
5’ to 3’
Why do we look at sequences of RNA
What if there is a mutation in the ribosomes; not going to do a good job making DNA
*Translation
Translating of a mRNA codons into a protein (amino acid chain)
Takes place on ribosomes in cytoplasm
Edited mRNA
Attaches to a ribosome
Each codon of the mRNA molecule…
Moves through the ribosome, the tRNA brings the proper amino acid to the ribosome
The anti condor on tRNA
It is complementary to the mRNA codon
The amino acids are joined together by
Chemical bonds called peptide bonds to build an amino acid chain called a “polypeptide”
*Start codons
Founds at the beginning of a protein
Only one - AUG (methionine)
*Stop codons
Found at the end of a protein (end of a polypeptide chain)
Three stop codons that do not code
For any amino acid therefore making the process stop
UAA, UAG, UGA
The cells uses the vital
DNA “master plan” to prepare RNA “blueprints”
The DNA molecules remains within the
Safety of the nucleus, while RNA molecules go to the protein-building sites in the cytoplasm — the ribosomes
*Mutation
Changes in the genetic material
(Like mistakes in copying or transcribing)
*Chromosomal mutations
Involve changes in the number or structure of chromosomes
Down syndrome
*Gene mutation
Mutations that produce changes in a single gene
*point mutations
Affects single nucleotide base is replaced with the wrong base (letter)
Ex. Sickle-cell anemia
*silent mutations
A base is changed, but the new codon codes for the same Amin acid. Not all mutation are harmful.
Typically it is the third letter in the codon
*substitution point mutation
That still codes for an amino acid, just the wrong amino acid
May or may not be harmful
Different points of gene regulation
During transcription
Post transcription
During translation
Post translation
Regulation of chromatin formation
Euchromatin vs heterochromatin
Positive control of the expression of individual genes
Transcription enhancement/inhibition
Increase enhancement
Nucleosome
Pulls dna apart and exposes it
Acetylation
Histone tails leads to euchromatin formation and makes expression possible
Methylation
His tones leads to condensation (heterochromatin formation) the prevents expression
Modification
His tones affects gene expression: other post-translation modifications
Tails
Acetylation
Methylation
Ubiquination
Sumoylation
Phosphorylation
Adding of methyl’s to nitrogenous bases often cytosine:
Tends to favor heterochromatin formation
Long term shutoff of gene expression
*genomic imprinting
Methylation passed on
*epigenetic inheritance
Changes in inheritance that do not involve the nucleotide sequence
Methylation of DNA
Importance to X chromosome inactivation
Histone code hypothesis
Specific pattern of methylation and acetylation determines euchromatin heterochromatin patterns and therefore gene expression
Exons
Expressed
Introns
Junk
RNA processing
Cap and tail added
Introns excised and exons spliced together
Binding promotes
The stable attachment of RNA polymerase to the promoter
Some (TBP) bind to the
TATA box in the promoter