transcription 3 Flashcards

1
Q

what is the main difference in eukaryotic gene regulation compared to prokaryotic

A

eukaryotic genes are individually regulated

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2
Q

why are eukaryotic genes individually produced and regulated

A

because certain genes may be used to make different things for different purposes

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3
Q

what transcribes all genes that encode proteins

A

rna polymerase 2

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4
Q

how many units does rna polymerase 2 have

A

12

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5
Q

what can rna polymerase cannot do

A

it cannot initiate transcription

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6
Q

what do eukaryotic transcription factors do

A

help rna polymerase bind

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7
Q

what do transcriptional activators do

A

they help attract rna polymerase 2 to the promotor region and to regulate rate and gene expression

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8
Q

what are ‘other proteins’ responsible for
sorry lol that’s legit what they’ve called them

A

unwinding chromatin to allow access for the transcription factors

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9
Q

how do proteins recognise the promoter region

A

the major groove of the double helix

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10
Q

what does the core promoter contain and at what location

A

TATA box at -30
initiator at +1

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11
Q

where is the enhancer located

A

-1000

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12
Q

where are the upstream sequence elements located

A

-100

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13
Q

how does initiation begin in eukaryotes

A

the TFII position rna pol 2 and separate the dna

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14
Q

which is the first protein to bind and what are the units they contain and what do they do

A

TFII2
its units are TBP - which recognises and binds to tata bo
TAFs allows other transcription factors to bind

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15
Q

what is the order of proteins binding
lol sorry

A

TFIID
TFIIA
TFIIB
rna pol
TFIIF
TFIIE
TFIIH

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16
Q

what is TFIIE and TFIIH

A

E- atpase
H- helicase

17
Q

what do all the transcription factors and rna pol form

A

pre-initiation complex

18
Q

what happens as elongation begins to occur
(hint - 4 things)

A

the c terminal will be phosphorylated
there will be conformational change in the rna pol and it will tighten
tfs will dissoicate
rna pol will acquire elongation proteins

19
Q

what does a core promoter that does not contain a tata box have and what transcription factor will recognise it

A

initiator and a downstream promoter element
will be recognised by TF2 I

20
Q

what will upstream sequence elements carry out

A

tissue specific enhancment

21
Q

what are the three types of upstream sequence motifs

A

-bound by general transcription
-allow tissue-specific expression
-a response to stimuli

22
Q

which way do enhancers work

A

either orientation

23
Q

what does the enhancer interact with

A

the PIC

24
Q

what do different cell types have

A

different activator proteins