STEP 1 Week 1 Flashcards
Four impairments in glycogenolysis
Characteristics of Pompe disease and cause
Cause: deficiency of acid alpha glucosidase
Normal glucose levels
Extreme cardiomegaly
Glycogen accumulation in lysosomes
Muscle pierced for chest tube at 5th intercostal space, mid-axillary line
Serratus anterior
Pierre Robin Sequence
Progression of cells after MI
Regulatory T-Cell function
What is the IPEX disorder
Mutation in FOXP3 expression, leads to unrelgulated T and B cell activity
IPEX - Immune dysregulation, polyendocrinopathy, enteropathy, X-linked
See: autoimmune neteritis (villous atrophy,etc), excematous dermatitis, type 1 diabetes in infant
Trigylceride metabolism to glucose
Best long-term therapy for specific phobia
exposure-based CBT
Ovarian venous drainage
Left ovarian vein into left renal vein
Right ovarian vein into IVC
Distribution of data on a bell curve (percentiles)
When is B-HCG detectable in serum and urine
β-hCG is produced by the syncytiotrophoblast after implantation, which generally occurs 6-7 days after fertilization at the earliest. β-hCG typically is detectable in the maternal serum approximately 8 days after fertilization, whereas it is detectable in the urine 14 days after fertilization. Therefore, a serum pregnancy test will be positive before a urine pregnancy test.
What is hyperacute transplant rejection
Occurs minutes to hours
Preformed recipient antibodies against graft antigens
See: mottling and cyanosis, fibrinoid necrosis and capillary thrombotic occlusion
What is acute transplant rejection
Usually <6 months
Donor antigens induces activation of naive immune cells - Cell mediated, sensitization of recipient T cells
See: lymphocytic infiltrate, cd4 deposition, neutrophils, necrotizing vasculitis
What is chronic transplant rejection
Months to years later
Chronic low-grade immune response refractory to immune repression, mixed-cell and humoral
See: vascular wall thickening, interstitial fibrosis, parenchymal atrophy
Process of tRNA amino acid binding
The 3’ CCA tail of tRNA serves as the amino acid binding site.Aminoacyl tRNA synthetase is the enzyme responsible for “loading” the appropriate amino acid to the 3’ terminal hydroxyl group of the CCA tail.
How can buprenoprhine precipitate withdrawals
It is a partial opiod receptor agonist that binds with high affinity but low activity. It can displace other opioids leading to withdrawal
Effects of unilateral renal artery stenosis
Location and effect of adrenergic receptors
What does staph secrete that allows Haemophillus to grow on blood agar
V Factor (NAD+)
Also helps release factor X (hemetin), both are necessary for haemophilus
Pathophys of an acute hemolytic transfusion reaction
Type II hypersensitivty
IgG and IgM autoantibodies with complement activation (cell lysis)
What are clavulinic acid, subactam, and tazobactam
beta-lactamase inhibitors
Most common cause of nosocomial blood stream infections
Intravascular catheters (allows staph to enter bloodstream)
What type of cells allow growth of HPV
Stratified squamous epithelium
Cervix, anus, true vocal cords
Manifestations of hypovolemia
Pathophys of rheumatoid arthritis
Activation of CD4+ T (Th1, Th17) cells and macrophasges secrete IL-1 and TNF-alpha, leading to articular destruction
IL-1 : induces matrix metalloproteinases and T cell response
TNF-alpha: inflammatory cells
Both activate osteoclasts
Causes of nonvalvular heart failure and changes in wall thickness and function
Effects on heart of volume overload vs pressure overload
Volume overload : eccentric hypertrophy (decompensated heart failure)
Pressure overload: Concentric hypertrophy (hypertensive heart disease)
What nerve is impacted in Bell’s palsy
facial nerve (CN VII)
Functions of facial nerve (CN VII)
Motor output to the muscles controlling movement of the face (including eye closure)
Somatic sensation afferents from portions of the pinna and external auditory canal
Special sensation afferents for taste from the anterior two-thirds of the tongue
Parasympathetic innervation of the submandibular and lacrimal glands
Motor innervation of the stapedius muscle, which causes sound dampening
Changes to the lungs with age (lung capacity, FVC, RV)
Lung capacity is unchanged - chest compliance goes down (stiff ribs) and lung compliance goes up (loss of recoil)
FVC goes down (RV bigger portion of TLC)
RV goes up
Sources of nitrogens in purines
Sources of carbon in purines
Ribavirin MOA
Inhibits IMP dehydrogenase, blocks conevrsion of IMP to GMP
Mycophenolate MOA
Immunosuppresant
Blocks IMP dehydrogenase
6-mercaptopurine MOA
What is Lesch-Nyhan syndrome
X-linked absence of HGPRT (cant do purine salvage)
See excess uric acid production (juvenile gout), excess de novo purine synthesis (high PRPP, IMP)
SX: hypotonia, chorea, self-mutilation
Carbon and nitrogen sources for pyrimidines
What is orotic aciduria
Autosomal recessive defect in UMP synthase
SX: orotic acid in urine, megaloblastic anemia, hypersegmented neutrophils
TX: Uridine
Signs of orithine transcarbamylase deficiency
Causes a breakdown in urea cycle
See: increased carbamoyl phosphate and orotic acid in urine, but also see increase in ammonia
MOA of 5-FluroUracil
5-FU is a chemotherapy agent
Mimics uracil. Blocks thymidilate synthase and formation of dTMP
MOA of methotrexate
Blocks dihydropholate reductase so cant form THF, leads to blocked formation of dTMP
B12 vs Folate deficiency
Features of bulemia nervosa
What are the universal stop codons
UAA, UAG, UGA
Lead to releasing factor
Complete vs partial mole
Afferent vs efferent nerves for visual light reflex
Afferent: CN II
Efferent: CN III (edinger westphal for other eye, PNS)
Clinical features of selective IgA deficiency
MOA of carbon monoxide poisoning
CO binds to heme iron with a much higher affinity than oxygen, creates carboxyhemoglobin.
Impedes oxygen delivery and decreases cardiac output
What is type II error
Probability of concluding no difference exists when one actually does exist
What is Power
1 - Type II error
Clinical features of PCOS
Pathophys of PCOS
Increased activity of activity of 17α-hydroxylase; 17,20 lyase; and 3β-hydroxysteroid dehydrogenase. The overexpression of these enzymes results in elevated androgen levels (eg, testosterone, androstenedione, DHEA) and the clinical consequences of hirsutism and acne.
Incresed risk for endometrial carcinoma
Pharyngeal and aortic arches derivatives (1-6)
Changes to glomerular filtration during pregnancy
Because blood volume and cardiac output goes up, GFR increases
Placental proteins also increae permeability of glomerular basement membrane, so see proteinuria
Source of single brain abscess vs multiple
Single - direct invasion from contiguous source
Multiple - hematogenous spread from distant infection
Exudative vs transudative pleural effusions
Regulation of glycogenolysis in liver vs muscle
In liver, regulated by glucagon and Epi through cAMP.
In muscle, regulated by muscle contraction (Ca2+) mostly and some cAMP
Characteristics of drugs that are mainly excreted by the liver
High lipophilicity
High volume of distribution
What is the drawback of using creatinine to measure GFR
Creatinine is secreted by the proximal tubules so the calculated GFR is 10-20% higher than actual GFR
Contents of superior occular vs inferior occular fissures vs optic canal
Features of TCA overdose
Most deaths come from cardiac arrhythmias and refractory hypotension
TX: Sodium Bicarbonate
Pathophys of rheumatic fever
Autoimmune reaction following GAS infection. Antibodies against strep M protein and N-acteyl-beta-D-glucosamine cross react
Infection in children marked by URI sx, stridor, brassy cough, barking cough, hoarsness, resp distress
Laryngotracheitis (croup)
caused by parainfluenza virus - paramyxovirus
Difference between GLUT 1, 2, and 4 transporters
Features of pyruvate kinase deficiency
Converts phosphoenylpyruvate to pyruvate
Sources of fuel over course of 24 hour fast
What is Von Gierke’s Disease (Glycogen storage disease type 1)
Glucose-6-phosphatase deficiency
Sever hypoglycemia between meals, lethargy, seizures, lactic acidosis (Cori cycle)
Enlarged liver (cant get glycogen out)
What is Pompe’s disease (glycogen storage disease II)
Acid alpha-glucosidase deficiency
Accumulation of ghlycogen inside lysosomes
Presents in childhood, severe
See enlarged muscles (cardiomegaly, macroglosia), hypotonia, no metabolic problems but have heart failure
What is Cori’s disease (glycogen storage disease type III)
Debranching enzyme deficiency
Similar to Von Girkes but mild hypoglycemia and have muscle involvement
See enlarged liver and also hypotonia
What is McArdle’s Disease (Glycogen storage disease V)
Glycogen phosphorylase deficiency
Adolescence or early adulthood
No liver problems, but have exercise problems - weakness and cramps
Myoglobinuria and urine turns dark after exercise
Uses of NADPH
What is respiratory burst
Killing of bacteria by phagocytes with oxygen
What is chronic granulomatous disease and features
How is fructose brought into glycolysis
What is essential fructosuria
Deficiency of fructokinase
Benign, fructose not taken up into liver, spills into urine
What is hereditary fructose intolerance
Deficiency in aldolase B
Get buildup up of fructose 1- phosphate and get depletion of ATP
See hypoglycemia, vomiting, hepatomegaly, FTT after weaning off breastmilk
How is galactose converted to glucose
What is classic galactosemia
Deficiency in galactose 1-phosphate uridyltransferase (GALT)
Galactose 1-phosphate builds up in liver and galactose is also converted to galactitol (accumulates in eye like sorbitol)
See hepatomegaly, jaundice, childhood cataracts
Have to avoid milk
Required cofactors for pyruvate dehydrogenase
NAD+
FAD+
CoEnzyme A
Thiamine
Lipoic Acid
What is the malate shuttle
Oxaloacete and NADH cannot cross membrane, but malate can. Malate is used to bring electrons in for NADH and then can be converted into oxaloacete inside mitochondria
How many ATP made per NADH/FADH2
3 per NADH
2 per FADH2
Inhibitors of electron transport chain
What tissues cannot use fatty acids for energy
RBCs (glycolysis only, no mitochondria)
Brain (glucose and ketones only)
What is the carnitine shuttle
Helps fatty acids undergo B-oxidation by moving fatty acyl coA into the mitochondria
Features of carnitine deficiency
Cant bring long chain fatty acids into mitochondria to break down fatty acids
What is a MCAD deficiency
Deficiency in medium chain Acyl-CoA dehydrogenase
AcetylCoA is low so gluconeogenesis is shut down
Pathophys of lactic acidosis in alcoholism
Genetic risk factors for Alzheimers
- Amyloid precursor protein on chromosome 21
- Presinilin 1 on chromosome. 14
- Presinilin 2 on chromosome 1
- ApoE4
Features of cystic fibrosis
Syphillis diagnostic serology
MOA of penicillins
Structurally simialr to D-alanine-D-alanine, bind to transpeptidase that inhibits formation of bacterial peptidoglycan cell way
Mechanisms of septic organ dysfunction (3)
Poor oxygen use
- Bacterial products trigger free radicals that lead to mitochondrial damage = decreased oxydative phosphorylation and lactic acidosis
- Vasodilation shunts blood quickly through organs
- Increased capillary permeability causes edema that increases distance O2 must travel to mitochondria
Deposition seen in poststrep glomerulonephritis
Starry sky (granular) deposition of IgG, IgM, and C3 immune complexes
Stages of alcohol withdrawal
What is integrin
Helps bind cells to one another by binding to fibronectin, collagen, and laminin
What is X-linked agammaglobulinemia
X-linked agammaglobulinemia is characterized by low or absent circulating mature B cells (ie, CD19+, CD20+, CD21+ cells) and pan-hypogammaglobulinemia (low IgG, IgM, IgA). Affected patients have increased susceptibility to pyogenic bacteria, enteroviruses, and Giardia lamblia due to the absence of opsonizing and neutralizing antibodies.
Sources of ATP during exercise (3 phases)
- Phosphocreatine shuttle
- Glycolysis
- Oxidative phosphorylation
Steps of insulin release (start with glucose receptor)
- Glucose enters cell through GLUT-2, broken down by TCA cycle into ATP
- ATP binds K+ channel and closes it, leading to depolarization
- Calcium channel opens
- Insulin release
Permeability of nephron regions to water
What is purulent pericarditis and most common causes
Structures derived from neural crest cells
SOME SALT
Schwann cells, odontoblasts, melanocytes, enterochromaffin cells, spinal membranes [pia and arachnoid], adrenal medulla/ganglia, laryngeal cartilage, tracheal cartilage
Visual pathway
Important HIV genes
Pol gene - encodes protease, reverse transcriptase, integrase
Env gene - surface glycoprotein, enables host immune escape
Nef gene - downregulates MHC 1 on infected cells
Major virulence factor of staph epidermis
Ability to produce biofilm - extracellular polysaccharide matrix
Hormonal control of pancreatic secretions
Prolonged exposure to loud noises causes hearing loss due to damage to the_____ of the ______.
Prolonged exposure to loud noises causes hearing loss due to damage to the stereociliated hair cells of the organ of Corti.
Higher frequency sounds are heard at the ____ of the cochlea
Earlier portion
Low frequency - farther in (cochlear cupula)
Risks and protective factors for epithelial ovarian cancer
The pathogenesis of epithelial ovarian cancer is linked to the frequency of trauma and repair at the ovarian surface. Oral contraceptives, multiparity, and breastfeeding are protective by decreasing the frequency of ovulation. Risk factors include BRCA mutation, nulliparity, and infertility.
What causes diastolic heart failure
Hypertension, obesity, infiltrative disorders (transythyretin-amyloid, sarcoidosis)
Caused by decreased LV compliance, see normal LVEF. and LV end-disatolic volume, but high LV filling pressures
Portions of hypothalamic nuclei that mediate food intake
Venteromedial. - mediate satiety, destruction = hyperohagia
Lateral - mediates hunger, destruction = anorexia
Portions of. hypothalamic nuclei that mediate heat
Anterior. - heat dissipation, destruction = hyperthermia
Posterior - heat conservation, destruction = hypothermia
Gram stain of common infectious urethritis organisms
N. Gonorrhea - Gram negative, see intracellulat diplococci
Chlamydia trachomatous and mycolplasma - do not graim stain because not enough peptidoglycan
Radial nerve function and sensory distribution
Function of Natural Killer cells
Recognize and kill cells with reduced MHC 1 expression (virus, tumor). Contain perforins and granzymes that lead to apoptosis
What is the alanine cycle
During starvation, alanine in muscles is transported to the liver. In the liver alanine is converted into pyruvate which can. be used to generate glucose
What is the Cori cycle
Muscle and RBC convert glucose to lactate which then goes to the liver. Lactate can then be converted to glucose to. be sent back to the muscle
Kwashiorkor vs Marasmus
Kwashiorkor is inadequate protein intake, see edema (low albumin)
Marasmus is insufficient calories, no edema
Hypoglycemia causes when after feeding vs fasting
After feeding: Galactosemia, hereditary fructose intolerance
Fasting: Glycogen storage disease
Sypmtoms of proprionic aciduria and methylmalonic aciduria
Poor feeding, hypotonia, vomiting, lethargy
Metabolic acidosis (anion gap)
Hypoglycemia and ketosis
Hyperammonemia, elevated organic acids in serum/urine
What is maple syrup urine disease
Branched chain amino acid disorder - deficiency of alpha ketoacid dehydrogenase
Get buildup of branched change AA and alpha ketoacids
Branched chain amino acids
Leucine, isoleucine, valine
Two causes of hypoketotic hypoglycemia and features
Carnitine deficiency - low carnitine levels, low acyl-carnitine levels
MCAD deficiency - High acylcarnitine. level and highicarboxylic acids
Features of ornithine transcarbamylase deficiency
High ammonia
High orotic acid
Hallmark of mitochodnrial disorder
High alanine
Pyruvate cannot be converted to. acetyl coA. (usually by. pyruvate dehydrogenase in mitochondria) so converted to alanine
Cell type and function
Cause and effect of midgut malrotation
Rotation of 180 instead of 270 degrees counterclockwise
Results in cecum in RUQ - intestinal obstruction due to bands connecting to mesentary over duodenum.
Can also get twisting around superior mesenteric artery
Lymph drainage of rectum
Above dentate line - internal illiac and inferior mesenteric, some superior mesenteric
Below dentate line - inguinal nodes
The live attenuated oral (sabin) polio vaccine creates a stronger ____ response than the inactivated (salk)
IgA - made in duodenal lumen
Contact dermititis, granulomatous inflamation, and reactive skin testing are all forms of ____
Type IV hypersensitivity - T cell mediated
Causes of eccentric vs concentric LV hypertrophy
Concentric - pressure overload
Eccentric - volume overload
How can cancer cells. mutate to resist anti-cancer drugs
The human multidrug resistance (MDR1) gene codes for P-glycoprotein, a transmembrane ATP-dependent efflux pump protein that has a broad specificity for hydrophobic compounds. This protein can both reduce the influx of drugs into the cytosol and can increase efflux from the cytosol, thereby preventing the action of chemotherapeutic agents.
EKG leads
Mechanical dysfunctions associated with MI timeframe and SX
Anion gap equation
Na+ - (Cl- + bicarb)
Normal: 10-14
Cause of an non-anion gap met acidosis
Loss of bicarb
Diarrhea, renal tubular acidosis, saline infusion
What muscles are targeted in pelvic floor strengthening
Levator ani
pubococcygeus, puborectablis, illeococcygeos
Difference between DNA replication in eukaryotes and prokaryotes
- Prokaryotes have 5 DNA polymerases, eukaryotes have 3
- Eukaryotic is much larger genome
- Prokaryotic is circular and has one cite of replication. Eukaryotic is linear with multiple cites (faster)
Portosystemic anastamoses
Low dose aspirin mechanism and side effects
COX-1 inhibition, risk of gastric bleeding
Pathophys of myasthenia gravis
Autoimmune disease that leads to dicrease in number of acetylcholine receptors, reduces the amplitude of the motor end plate potential
Hemodynamic changes seen in aortic regurgitation
Will result in eccentric hypertrophy so larger LV
Causes an overall increase in systolic bp due to increase cardiac output and contractility
Aortic diastolic will be low and LV diastolic will be high
MOA of acetominophen toxicity
Formation of NAPQI that disrupts hepatocyte mitochondrial function and causes hepatic oxidative damage
Abortive and preventative therapy for migraines
Pathogenesis of primary aldosteronism
Techniques for motivational interviewing
OARS
Open ended questions, affirmations, reflect, summarize
Portion of hypothalamic nuclei involved in circadian rhythyms
suprachiasmatic
Symptoms of parvovirus B19
Symptomatic anemia, decreased erythropoesis, transient aplastic crisis. Worse in patients with hemoglobin disorders
See giant pronormoblasts and intranuclear inclusions
Features of the Phenylalanine hydroxylase reaction
Hydroxylation of phenylalanine is irreversible so phenylalanine cannot be derived from tyrosine.
Phenylalanine hydroxylase uses the co-enzyme tetrahydrobiopterin (BH4) to supply reducing equivalents for the hydroxylation reaction.
Over the course of the phenylalanine hydroxylase reaction tetrahydrobiopterin is oxidized to dihydrobiopterin.
Tetrahydrobiopterin is regenerated from dihydrobiopterin by dihydrobiopterin reductase in a reaction involving the oxidation of NADPH.
What is hartnup disease
Autosomal recessive Absence of an AA transporter in the proximal tubule
Leads to loss of tryptophan in the urine, can cause niacin deficiency that lead to sx (pellagra)
What is the alanine cycle
Use of alanine to transfer ammonia to the liver
Drugs that can cause a folate deficiency
Phenytoin
Methotrexate
Trimethoprim
What is the hallmark of a B12 deficiency
Hugh methymalonic acid
Neuropathy (legs>arms)
What is pernicious anemai
Autoimmune destruction of gastric parietal cells (type 2 hsr) that leads to deficiency of intrinsic factor so low B12
Associated with. HLA-DR and gastric adenocarcinoma
What vitamin allows for conversion. of Fe3+ to Fe2+
Vitamin C
Improtant for Heme synthesis and collagen synthesis
Vitamin high in sarcoidosis
Vitamin D
Conversion to 1,25 hydroxyvitamin D independent of the kidney, so get high calcium
What is acrodermatitis enteropathica
Low Zinc
Dermatitis, decreased hair, diarrhea, poor growth
What is Lecithin-cholesterol acyl transferase (LCAT)
Catakyzes rdterification of cholesterol - packages it tightly in core of HDL
Activated by A-1 on HDL
What is the most common cause of community-acquired pneumonia and describe vaccine
Strep pneumoniae (Gram negative)
Two vaccines:
- Pneumococcal polysaccaride vaccine, 23 valent, moderate B cell response
- Pneumococcal conjugate vaccine, polysaccride conjugated to protein so get robust T cell response
Mechanism of cataracts
Nuclear sclerosis (layers), photooxidative damage to crystalline, osmotic damage
Gene and associations
Features of carcinoid syndrome
What types of cells are involved in superantigen. response
T- cells (IL-2)
Macrophages (IL-1)
MOA of opioid side effects
Direct activation. of mast cells - release of histamines
Conduct disorder vs Oppositional defiant disorder
Conduct disorder is more severe, includes aggressive behavior, stealing, destruction
Oppositional defiant disorder is less severe, more irritable mood and defiance
What type of collagen is found in scars?
Type I
Type I vs Type II muscle fibers
Symptoms of cauda equina syndrome
Sciatic nerve - back. pain, lower limb weakness
Pudendal nerve - saddle parasthesia
Pelvic splanchnic (PNS) - constipation and urinary retention
Risk factors and sx of anal squamous cell carcinoma
What are the retroperitoneal organs
SAD PUCKER
Impact of hyperthyroidism on SVR
Increased metabolic demand and direct effect of thyroid hormone on vascular smooth muscle leads to vasodilation and decreased SVR
What is a septic abortion and common organisms
Infected retained products of conception
Staph. aureus
E. coli and group B strep
Steps of insulin synthesis and secretion
Most common side effects if Amphotericin B
Renal toxicity - can get hypokalemia and hypomagensemia
Normocytic anemia
What is heparin induced thrombocytopenia (HIT)
IgG antibodies against heparin and platelet factor IV, induces platelet aggregation
TX: Direct thrombin inhibitor (hirudin, lepirudin, argatroban)
Fetal vs adult hemoglobin
Fetal hemoglobin is made up of 2 alpha and two delta subunits, and has a hgher affinity for oxygen (allowd for better delivery of oxgen to baby)
Adult hemoglobin is two alpha and two beta. Replaces fetal by 6 months
Clinical manifestations of hemochromatosis
What glucose transporter is responsive to insulin and where is it located
GLUT 4
Adipocytes and skeletal muscle
Common DNA damage cuased by UV radiation
Pyrimidine dimers
What is the cause of microsatellite instability
Deficiency of mismatch repair (DNA slippage that is not repaired)
Cause and SX of ataxia telangectasia
Deficiency in non-homologous end joining repair