Special topics Flashcards

1
Q

Fertilisation

A

Occurs in fallopian tube, sperm must get through Corona radiata, zona pellucida, membrane of secondary oocyte, cytoplasm of secondary oocyte. Fusion of pro-nuclei.

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2
Q

embryogenesis achievements

A

Patterning (spatial/temporal positioning), major axis (posterior, ventral, anterior, dorsal), 3 germ layers (ecto, meso, endoderm), rudimentary major organs form

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3
Q

blastocyst formation

A

fertilisation produces diploid cell via pro-nuclei fusion –> cell divides via cleavage –> morula –> blastocyst

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4
Q

blastocyst structure

A

Has blastocyst cavity, embryoblast (inner), trophoblast (outer), encompassed in zona pellucida

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5
Q

gastrulation - bilayer embryonic disc to trilayer

A

bilayer embryonic disc consists of ectoderm and endoderm. Primitive streak causes formation of mesoderm.

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6
Q

Stem cell hierarchy

A

Totipotent - gives rise to all cell types and extra embryonic tissue (zygote)
Pleuripotent - gives rise to all cell types (blastocyst)
Multipotent - all cell types of specific organ/tissue
Nullipotent - no more differentation, for replacement

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7
Q

Unipotent in skin

A

Found in basement membrane, migrates/differentiates up over 2-4 weeks until dead. Express different types of keratain during migration. Constant renewal.

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8
Q

Ex vivo gene therapy

A

treats monogenetic condition (only mutation in one cell) by correcting mutation and retaining 5% stem cells before grafting onto skin

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9
Q

Disulphide bonds

A

between cysteine amino acids, covalent bonds so can be very strong in oxidising environments. Maintains tertiary structure by linking N terminus to C terminus

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10
Q

Domains

A

Parts of tertiary structures, have different functions (e.g. binding, chewing bacterial cell wall), proteins may have more than one

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11
Q

Intrinsically disordered proteins

A

Their structure comes from having no structure (temporarily), found covering nuclear pores for selective permeability, may fold upon binding to another protein

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12
Q

4 major forces maintaining protein shape

A

hydrogen bonds and hydrophobic interactions (both weak), ionic interactions and disulphide bonds

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13
Q

Tertiary structure

A

every atom affects every other atom, can’t tell tertiary structure from DNA sequence, determined mainly by hydrophobic interactions but also ionic interactions

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14
Q

Secondary structure

A

Localised organisation, only involves main chain (N terminus, C terminus, alpha carbon). 3 types: beta strands, alpha helix, random coils.

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15
Q

central alpha carbon

A

carbon bonded to NH group, carboxyl group, and R chain. Point of rotation, forms flat plane. Protein folds are limited due to limited angles/rotation.

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16
Q

what processes occur in first week of embryogenesis/embryonic phase

A

fertilisation, cleavage of zygote, formation of morula and blastocyst, implantation

17
Q

what structures will ectoderm turn into

A

all nervous tissue (includes brain and spinal cord), epidermis, outer tissues

18
Q

mesoderm structures

A

all cardiovascular, lymphatic, and muscular systems, and kidneys

19
Q

endoderm structures

A

gut, bladder, endocrine function (pancreas, thyroid, thymus)

20
Q

trophoblast derivatives

A

chorion and therefore placenta. chorion + endometrium (uterus lining) = placenta

21
Q

embryoblast (inner cell mass) derivatives

A

embryo itself

22
Q

epiblast vs hypoblast

A

epiblast gives rise to ectoderm while hypoblast gives rise to endoderm

23
Q

trophoblast function

A

Thickens uterine wall, releases hormones to prevent menstruation (human chorionic gonadotropin), releases proteases for implantation

23
Q

primitive streak formation

A

ectodermal cells move from posterior to anterior forming a groove, pushes away endoderm cells for mesoderm to arise.

23
umbilical cord is formed by..
connecting stalk (posterior) and yolk sac
24
amnion function
amniotic cavity filled with fluid protects foetus from mechanical stress and temperature
25
week 1 of embryogenesis
fertilisation 12-24 hours post ovulation, cleavage of zygote 30 hours post fertilisation, morula 3-4 days post fertilisation, blastocyst 4-5 days post fertilisation, implantation 6 days post fertilisation
26
weeks 2-4 of embryogenesis
trophoblast development, embryonic disc, gastrulation,
27
planarity of secondary structure
strong covalent peptide bonds form flat plane that restricts movement to two twists (pi, sine) called ramachandran angles. Restricted movement dictates protein folding
28
Alpha helix and beta sheets, random coil structures
Alpha helix can very rarely be inverted Beta strands come together to form beta sheets Random coils are stable, locked in place so actually have structure
29
primary structure
topological bond info, order of bonds
30
protein denaturation factors
pH, salt concentration (+ or - charges), temperature
31
chaperone proteins
proteins that help fold other proteins; contain hydrophobic residues; can change folding environment by diminishing hydrophobic effect temporarily
32
fibrous protein structure
hydrophobic residues down (three) side chains making it insoluble, thin and long, metabolically inactive
32
globular proteins structure
globular - strands curl so hydrophobic parts in core, surrounding water molecules make it soluble; metabolically active (e.g haemoglobin, insulin)