proteins Flashcards

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1
Q

name basic protein synthesis

A

DNA - transcription to RNA - translation to protein

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2
Q

name some classes of amino acid

A

acidic, aromatic, aliphatic(hydrocarbon), basic(nitrogen group), sulphur-containing, uncharged polar

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3
Q

what is a peptide bond

A

Formation of a covalent bond with the loss of 1 molecule of water

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4
Q

what is the primary structure

A

The sequence of amino acids in a polypeptide chain

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5
Q

what is the secondary structure

A

Is the spatial arrangement of amino acid residues that are near each other in the linear sequence
alpha helixes and beta sheets

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6
Q

what is tertiary structure

A

The spatial arrangement of amino acid residues that are far apart in a linear sequence

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7
Q

what is secondary structure held together by

A

h bonds

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8
Q

what is tertiary structure held together by

A
van der Waals
Ionic interactions
Hydrogen bonds
Disulphide bridges
Hydrophobic interactions
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9
Q

where and what are disulphide bonds

A

These are strong covalent bonds between two cysteine residues
They are common in extra-cellular proteins.

also bind the light and heavy chains in antibodies

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10
Q

what is quaternary structure

A

Refers to the spatial arrangement of individual polypeptide chains in a multi- subunit protein

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11
Q

what happens when a protein is denatured

A

Decreased solubility
Altered water binding capacity
Loss of biological activity
Improved digestibility

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12
Q

what are the 3 other types of proteins

A

Glycoproteins
Lipoproteins
Metalloproteins

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13
Q

what are glycoproteins

examples?

A

Compound composed of protein and carbohydrate

Immunoglobulins

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14
Q

what is glycosylation

A

post translation modification - where a sugar molecule binds to the protein

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15
Q

what dose glycosylation do/ effect

A
Protein stabilisation 
Affect solubility
Protein Orientation 
Signalling
Cell recognition
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16
Q

what are lipoproteins
what do they do
examples

A

Protein and lipids are either covalently or non-covalently bonded together

transport of water-insoluble fats and cholesterol in the blood

HDL, LDL

17
Q

what are metalloproteins

what are the functions

A
Protein molecule with a bound metal ion
help protein to be/do
Enzymes
		Storage
		Signalling
		Transport
18
Q

what are the 3 structures of proteins

A

globular , fiborius and membranpous

19
Q

what do globular proteins do

A
Enzymes
Messengers (hormones)
Transporters
Stock of amino acids
Structural function e.g. actin and tubulin
20
Q

what do fiborous proteins do

A

Bone matrices
Muscle fibre
Tendons
Connective tissue

21
Q

what do membranous do

A

Relay signals
Membrane transporters
Membrane enzymes
Cell adhesion molecule

22
Q

what is co-operative binding

A

the alteration of a proteins shape and assecsibility due to the binding of a molecule

23
Q

what is collagen

A

25 percent of proteins in humans (most in humans)

high tensile strength

24
Q

what type of proteins is a LDL receptor

where is it what dose it do

A

Glycoprotein
Present on the surface of all cells
Causing the internalisation of LDL - leading to the breakdown of LDL by lysosomes

25
Q

what is a lysosome

A

a vesicle containing degenerative enzymes