PHYLOGENETICS L22 Flashcards

I. Systematics - SEQ Linnaean system II. Basics of phylogenetics - INTERPRET phylogenetics - CC types of groups III. Constructing phylogenies - SEQ making phylogenies - CC homologous/analogous

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1
Q

taxonomy

A
  • naming
  • describing
  • classifying
  • used Linnaean system
  • biological nomenclature
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2
Q

phylogeny

A
  • evolutionary history of species or groups
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3
Q

cladistics

A
  • a method of systematics based on phylogenetics

- each clade nested within larger groups

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4
Q

branch point

A
  • represents divergence of 2 lineages from common ancestor
  • represents dichotomies - 2 way branch points
  • branches can be rotated about nodes, does not change relationship
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5
Q

sister taxa

A
  • groups of organisms that share an immediate common ancestor
  • each others closest relatives
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6
Q

basal taxon

A
  • lineage that diverges early in history of group
  • 1st to diverge from common ancestor
  • outgroup
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7
Q

ingroup

A
  • group that you are studying

- everything else on tree

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8
Q

polytomy

A
  • branch point with more than 2 groups

- indicates unclear evolutionary relationship

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9
Q

monophyletic group

A
  • a common ancestor and ALL of its descendants
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10
Q

paraphyletic group

A
  • a common ancestor and SOME of its descendants
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11
Q

polyphyletic group

A
  • distantly related species, but not most recent common ancestor
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12
Q

ancestral trait

A
  • trait present in outgroup
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13
Q

derived trait

A
  • trait present in ingroup, absent from outgroup
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14
Q

shared derived trait

A
  • derived trait present in all members of ingroup
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15
Q

homologous structures

A
  • similar due to common ancestry

- useful for cladistics

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16
Q

analogous structures

A
  • similar due to convergent evolution
  • similar selective pressures – similar character states
  • NOT useful for cladistics
17
Q

evaluating molecular homology

A

sequence genome(s) – align sequences – evaluate differences –

    • few differences – closely related
    • many differences – distantly related