Phylogenetics Flashcards

1
Q

What is descent with modification?

A

All species, living and extinct, had descended without interruption, from one or a few original forms of life

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2
Q

What is something that all life on Earth shares?

A

a common ancestor (descent with modification = diversity today)

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3
Q

What are the 8 (or 9) taxons?

A

(Life)
Domain
Kingdom
Phylum
Class
Order
Family
Genus
Species

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4
Q

Who is the father of modern taxonomy and systematics?

A

Carolus Linnaeus

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5
Q

What is binomial nomenclature?

A

every organism is given a 2-part Latine name 1) a generic name (=genus, which is capitalised) and 2) a specific name (=species which is lower case)
e.g. Homo sapiens (Humans)

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6
Q

What is a genus?

A

A group of one or more species related by common descent from a recent ancestor and sharing similar traits

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7
Q

What is a species?

A

a group within a genus whose members share the same set of structural traits and can successfully interbreed with one another to produce fertile offspring

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8
Q

What is hierarchical classification?

A

a filing system for grouping species into a hierarchy of general categories. (nested pattern of similarities among species)

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9
Q

What is a polymorphic species?

A

the occurrence of two or more different forms of individuals of the same species

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10
Q

What is a cryptic species?

A

two or more morphologically identical species

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11
Q

What is the biological species concept?

A

organisms are members of the same species if they can mate with each other when they encounter each other in nature and produce fertile, viable hybrids

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12
Q

What are systematics?

A

field of biology that recpnstructs the evolutionary history (pyllogeny) and studies the patterns of relationships among organisms (taxa): visualised as evolutionary trees

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13
Q

What are phylogenetic trees?

A

genealogies for organisms
is a hypothesis regarding the evolutionary history for a group of organisms

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14
Q

how is closeness of relationships determined in a phylogenetic tree?

A

by looking to see how recently two groups shares a common ancestor

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15
Q

in phylogenetic trees, what is the order of branches (nodes) mean?

A

the sequence of events in time

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16
Q

on a phylogenetic tree what are sister groups?

A

groups more closely related to one another than any other group

17
Q

what are clades?

A

a group of organisms that represent a common ancestor and all the descendants of the ancestor

18
Q

what is a taxon?

A

a group of organisms that is given a name, which ideally share a common ancestor

19
Q

what are natural taxa?

A

when clades (monophyletic groups) and taxa are consistent with common ancestry

20
Q

what is a monophyletic group?

A

taxa that encompass an ancestor and all its descendants (also called a clade), members bound together by common ancestry not shared wuith other taxa

21
Q

What is a paraphyletic group?

A

a taxon that includes an ancestor, but not all of the descendants of that ancestor (artificial taxa)

22
Q

What is a polyphyletic group?

A

a taxon that has at least two separate evolutionary origins from unrelated ancestors

23
Q

What is homology?

A

likeness among groups of organisms due to shared ancestry

24
Q

What is convergent evolution?

A

species from different evolutionary linmeages may come to resemble one another if they have similar ecological roles and natural selection generates analogous adaptation (homoplasy)

25
Q

what are plesiomorphic (or ancestral) characters?

A

characteristics shared by all members of the group including the most recent common ancestor

26
Q

What are apomorphic (or derived) characters?

A

Homologous characters that have evolved more recently 9after divergence from the common ancestor) and therefore only occur among certain taxa when building a phylogeny

27
Q

What is an Ingroup taxa?

A

any group of theoretically related organisms

28
Q

What is an Outgroup taxa?

A

a group or taxon used for comparative purposees in a phylogenetic analysis: related to the ingroup but presumed to have diverged before the ingroup diversifies

29
Q

what is parsimony?

A

the most plausible explanation of an occurrence or phenomenon is often the simplest, involving the fewest assumptions or evolutionary changes