Nucleic Acids and DNA Replication Flashcards
What is a nucleotide?
A monomer that makes up a polynucleotide
Give 2 examples of polynucleotides
DNA and RNA
What is a DNA nucleotide made up of?
Phosphate, a pentose sugar and a nitrogen containing base
What is the pentose sugar in DNA?
deoxyribose
What are the nitrogen containing bases in DNA?
Adenine, Thymine, Cytosine and Guanine
What does DNA stand for?
Deoxyribonucleic acid
How many strands does DNA have?
2
What sort of polynucleotide is DNA?
Long
What is the role of DNA?
It carries genetic information which codes for proteins
Why didn’t scientists believe DNA carried genetic information?
Because of its relatively simple structure
In a molecule of DNA how do the strand run?
Antiparallel
How are complimentary bases join in DNA?
By hydrogen bonds
What is the DNA backbone known as?
The sugar-phosphate backbone
How do nucleotides join to form a polynucleotide?
Condensation reaction
What bonds form between nucleotides?
Phosphodiester
What does A pair with in DNA?
T
How many hydrogen bonds form between A-T
2
What does C pair with?
G
How many hydrogen bonds form between C-G?
3
What is different about an RNA nucleotide?
The pentose sugar is Ribose instead of Deoxyribose
What can the RNA nitrogen containing bases be?
Adenine, Uracil, Cytosine and Guanine
What sort of polynucleotide is RNA?
Short
What is the role of RNA?
It transfers genetic code from DNA (in the nucleus) to ribosomes in the cytoplasm
What are ribosomes formed from?
RNA and proteins
What do ribosomes form?
Proteins
In RNA what does A pair with?
U
Which enzyme unwinds the DNA double helix?
DNA helicase
How does DNA helicase work?
By breaking hydrogen bonds between complimentary bases
What happens to both strands once they are separated?
They act as templates
What happens to the template strands?
They attract free nucleotides
Which enzyme forms phosphodiester bonds?
DNA polymerase
How does DNA polymerase work?
It joins free nucleotides by catalysing the condensation reaction that forms phosphodiester bonds
Why is DNA replication semi-conservative?
New DNA contains one original strand and one new strand
How are the original strand and the new strand joined?
By DNA ligase
How do the DNA strands run?
Antiparallel
What effect does DNA being antiparallel have on nucleotides?
They are arranged differently
In what direction does DNA polymerase travel?
5 prime to 3 prime
Why does DNA polymerase travel 5 to 3 prime?
The active site of DNA polymerase has a specific tertiary structure and only substrates with the correct orientation (complimentary orientation) can form an enzyme-substrate complex
What happens as a result of DNA polymerase travelling 5 to 3 prime?
One strand is continuously formed and the other is formed in fragments
What is the continuously formed strand called?
The leading strand
What is the fragmentally formed strand called?
The lagging strand
How is the lagging strand formed?
In short fragments which are made as bases are exposed/paired up because of the direction of travel of DNA polymerase
What happens to the two strands of DNA after the sugar-phosphate backbone is reformed?
Hydrogen bonds reform between complimentary bases
How to free nucleotides attach?
By complimentary base pairing
What does semi-conservative DNA replication mean?
New DNA is made up of one original strand and one new strand
How can it be proved that DNA replication is semi-conservative?
A population of bacteria are cultured in a growth medium where the only nitrogen available is heavy nitrogen (N15) so that when centrifuged only one (heavy) band is observed. The cells are then transferred to a medium with only light nitrogen (N14). After one replication the DNA strand will be an intermediate containing 1/2 (N14) and 1/2 (N15) and will appear as one band double the width. After two replications in a light nitrogen (N14) environment two intermediate bands (as seen in 1st rep|) will be observed and two light bands which contain only light nitrogen (N14)
In which phase of interphase does DNA replication occur?
S1
What is the enzyme called which joins the nucleotides together to form a new strand during DNA replication?
DNA Polymerase
After the DNA strands have separated during DNA replication, what is attracted to each strand?
Nucleotides