Nucleic acids Flashcards
what is the structure of a nucleotide
a pentose sugar with a phosphate group and a base attached
what are nucleotides
monomers that make up DNA and RNA
what is the structure of a DNA nucleotide and what possible bases are there
a phosphate group attached to a deoxyribose sugar with either an A,G,C or T base attached
What are the full names of all the possible bases
adenine, guanine, cytosine, thymine and uracil
what is the structure of RNA and what are the possible bases that can be attached
a phosphate group attached to a ribose sugar with either an A,C,G or U base attached
what bases are purines
adenine and guanine
what bases are pyrimidines
cytosine, uracil and thymine
what is the difference between and purine and a pyrimidine
purine contains two carbon-nitrogen rings joined together whereas pyrimidines only have one carbon-nitrogen ring therefore is smaller
what are ADP and ATP
phosphorylated nucleotides
What is the structure of ADP
adenine, ribose sugar and two phosphate groups
What is the structure of ATP
adenine, ribose sugar and three phosphate groups
how is ATP synthesised
from ADP and an inorganic phosphate , the ADP is phosphorylated and a new phosphate bond is formed
Describe the structure of DNA
composed of two polynucleotide strands joined together to form a double helix shape, hydrogen bonding between bases in a process called complementary base pairing, antiparallel so run in opposite directions, twist to form a double helix
what does the base adenine pair with in complementary base pairing
thymine
what does the base cytosine pair with in complemenatry base pairing
guanine
Describe the process of purifying DNA
break up cells in the sample
make up a detergent solution (washing up liquid, slat and distilled water)
add broken cells to detergent
incubate beaker in a water bath at 60oc
the salt then binds to the DNA and causes it to clump together
the temperature should be high enough to prevent enzymes from breaking down the DNA
allow to cool
filter
add protease enzymes to filtered mixture
dribble cold ethanol down the side of the test tube so it forms a layer on top of DNA- detergent mixture
a white precipitate will form which can then be removed with a glass rod
describe the process of DNA replication
DNA helicase breaks down hydrogen bonds between complementary base pairs
helix unzips to form two single polynucleotide chains
each original strand acts as a template
free-floating DNA nucleotides join to the exposed bases using complementary base pairing
the nucleotides on the new strand are joined together by DNA polymerase
this forms the sugar-phosphate backbone
hydrogen bonds form between the bases on the original and new strand
strand retwists to form double helix
each new DNA molecule contains one strand from original molecule and one strand
define the term semi-conservative
refers to DNA replication when half of the strands in each new DNA molecule are from the original piece of DNA and the other half are from the new strand
Why does DNA replication have to be accurate
to make sure genetic information is conserved
what is a mutation
a change in the DNA base sequence
what bond joins two nucleotides
phosphodiester
what is a gene
a sequence of DNA nucleotides that codes for a polypeptide
what codes for an amino acid
base triplet
what is the role of messenger RNA (mRNA)
single polynucleotide strand, made in nucleus during transcription, carries genetic code from nucleus to cytoplasm, in mRNA three adjacent bases are called a codon
What is transfer RNA
single polynucleotide strand, hydrogen bonds hold its shape, has a specific sequence of three bases and one end called an anti-codon
found in the cytoplasm where it carries the amino acids that are used to make proteins to the ribosomes
what is rRNA
forms ribosomes along with proteins, catalyses the formation of peptide bonds between amino acids
why is genetic code described as non-overlapping
each base triplet is read in sequence and base triplets don’t share their bases
why is genetic code described as degenerate
amino acids can be coded for by more than one base triplet
why is genetic code described as universal
the same specific base triplets code for the same amino acids in all living organisms
describe the process of transcription
RNA polymerase attaches to DNA and the hydrogen bonds between two DNA strands in the gene break, DNA uncoils,
one the strands is the used as a template
the RNA polymerase lines up free nucleotides alongside the template strand, complementary base pairing means the mRNA strand becomes a complementary copy of the DNA template, except the base T is replaced with U
the RNA nucleotides are then joined to the DNA bases by NA polymerase
RNA polymerase the moves along the DNA assembling the mRNA strand and they hydrogen bonds reform once RNA polymerase has passed by and strands coil back into double helix
when RNA polymerase meets a stop codon, it stops making mRNA and detaches
mRNA then movs out of the nucleus through the nuclear pores and attaches to a ribosome