Mycobacteria, Other AFB, Antimycotic Agents Flashcards

1
Q

Mycobacteria

Morphology and Cultivation

A
  • Slender, straight or slightly curved rods (1-4 cm)
  • Colonies appear rough, granular, and buff-colored
  • Some atypical mycobacteria are rapid growers
  • Most very slow growing, including M. tuberculosis
    • Generation time up to 18 hrs
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2
Q

Mycobacteria

Species

A
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3
Q

Mycobacterial Infection

Classification

A
  • Mycobacerium tuberculosis
    • ~ ⅓ of world population infected
    • Humans only known reservoir
    • 85% of TB cases present with pulmonary sx
  • Mycobacterium avium-intracellular
    • Atypical mycobacteria
    • Ubiquitously found in fresh and salt water worldwide
    • Usu. only infects immunocompromised pts
    • Mostly pulmonary disease but also infects other tissues
  • Mycobacterium leprae
    • Causes leprosy
    • Infects skin and peripheral nervous system
    • Very slow growing ⇒ progressive course over a long time
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4
Q

Mycobacteria

Properties

A
  • Aerobic
  • Bacillus ⇒ slender straight or curved rods
  • Highly resistant to:
    • Drying
    • Many disinfectants
    • Acids
    • Alkalis
  • Heat sensitive
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5
Q

Mycobacteria

Cell Wall

A

Lipids are 60% of cell wall structure

Inside ⇒ outside:

  1. Cytoplasmic membrane
  2. Lipoarabinomannan (LAM)
    • Anchored to cell membrane
    • Functionally related to O-antigen of LPS
  3. Murein ⇒ thick peptidoglycan layer
    • 2 chains of alternating sugars linked by polypeptide chains
  4. Arabinogalactan ⇒ polymer consisting of arbinose and galactose
    • Attached to cell wall & mycolic acid chains
  5. Mycolic acids ⇒ long alkyl chains
    • Each arabinogalactan attached to 60-90 myolic acid chains
    • Forms waxy protective lipid shell
    • Additional lipids also present
    • Reason for resistance to acid decolorization
      • Do not take up dyes in gram staining
    • Contributes to abx resistance
  6. Outer membrane of secreted phospholipids
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6
Q

Mycobacteria

Visualization

A
  • Ziehl-Neelson or Kinyoun stains ⇒ bacteria that retain the primary stain after decolorization are called acid-fast ⇒⇒ Mycobacteria called acid fast bacilli (AFB)
    1. Apply primary stain, carbol fuchsin
    2. Decolorize with acid alcohol
    3. Counterstain with methylene blue
  • Visualize by fluorescent staining ⇒ Auramine-rhodamine
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7
Q

Tuberculosis

Epidemiology

A
  • Globally:
    • ~ 2.3 billlion Latent TB Infections (LTBI)
    • ~ 9 million new active cases / yr
    • ~ 1.4 million deaths / yr
    • 22 countries have 80% of all TB cases
  • USA:
    • ↑ incidence since 1985
      • Likely d/t AIDS epidemic
    • ↓ since 1993
      • TB control programs
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8
Q

Tuberculosis

Transmission

A
  • Via inhalation of mycobacteria in droplet nuclei
    • ~ 3,000 in a single cough
  • < 10 bacilli may initiate infection
  • Droplet nuclei dry and may become airborne
    • Remains infectious for extended periods
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9
Q

Tuberculosis

Transmission Risk Factors

A
  • Overcrowded areas
  • Prisons
  • Foreign born
  • HIV-infection
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10
Q

Tuberculosis

Invasion

A

Facultative intracellular pathogens

  • Ingested by alveolar macrophages
  • Grow within non-activated MΦ and outside of them
  • Prefers sub-pleural location near fissures
  • Lesion development, progression, and resolution depends on:
    • # of mycobacteria inhaled
    • Subsequent multiplication
    • Host immune response
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11
Q

M. tuberculosis

Virulence Factors

A
  • Facultative intracellular pathogen
    • Able to grow within MΦ
  • Liproarabinomannan (LAM)
    • ⊗ MΦ activation
    • Scavenges oxygen radicals
    • ⊗ Phagolysosome fusion
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12
Q

TB

Exposure

A
  • ⊕ Contact with a person w/ contagious pulmonary TB
  • ⊖ PPD skin test
  • Normal CXR
  • Some exposed persons develop infection w/ subsequent PPD conversion, others do not
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13
Q

Tuberculosis

Infection

A
  • ⊕ PPD skin test
  • No physical findings of disease
  • CXR normal or reveals old granulomas or calcifications in lung or regional lymph nodes
  • Requires preventative therapy
  • 90% remain asymptomatic
  • ~ 5% develop disease within 2 years of infectionprimary TB
  • ~ 5% develop disease at some later timereactivation disease
    • Usually d/t ↓ immune response with age, immunosuppressive disease, or therapy
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14
Q

Tuberculosis

Disease

A

Infected individual with signs, symptoms, and/or radiographic findings consistent with disease.

May be pulmonary and/or extrapulmonary.

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15
Q

Tuberculosis

Clinical Infection

A

Characterized as a chronic pneumonia.

Onset is insidious.

Primary TB is usually mild.

  • TB is an indolent, wasting, fibrile illness
    • Chronic productive cough ± hemoptysis
    • Fatigue
    • Weight loss
    • Night sweats
    • Weakness
    • Fever
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16
Q

TB

Primary Infection

A

Varies: completely asymptomatic → primary progressive disease

  • Early during infection prior to immune response ⇒ organisms grow uninhibited @ pulmonary & additional sites
  • Tubercle or Ghon focus ⇒ productive granuloma caused by mycobacteria
    • Center ⇒ multinucleated giant cells containing organism ± caseous necrosis
    • Middle ⇒ epitheloid cells
    • Outer ⇒ fibroblasts, lymphocytes, and monocytes
  • Ghon complex ⇒ granuloma within the lung and within a draining hilar LN
  • Granuloma may heal by fibrosis and calcification ⇒ lung scarring
  • May result in lymphohematogenous spread throughout body & seeding of lung apices
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17
Q

Progressive Primary TB

A
  • May directly result from lesion eroding into bronchioles ⇒ cavitation & dissemination within lung
  • Lymphohematogenous spread ⇒ remote dissemination ⇒ miliary tuberculosis
  • Child < 5 y/o @ high risk for progressive 1° TB
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18
Q

Secondary Pulmonary TB

Etiology

A
  • Most cases d/t reactivation of latent TB
    • Usually in apical portion of lung
    • Leads to chronic pulmonary diseases w/ 1 or more productive lesions
    • Associated with conditions that ⊗ immune system
      • Alcoholism
      • DM
      • Old age
      • Immunosuppressive therapy
      • AIDS
  • Can result from an exogenous secondary infection
    • Exposed to TB again
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19
Q

Secondary Pulmonary TB

Manifestations

A
  • Cough
  • Fever
  • Fatigue
  • CXR ⇒ usually show upper lobe involvement with a cavitary lesion
  • ± TB pleurisy w/ rupture of cavity or granuloma into pleural space ⇒ empyema
  • Sputum smear and PPD usually ⊕
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20
Q

Miliary Tuberculosis

A

Dissemination and seeding of TB bacilli to various distant organs.

  • Develop infectious foci in meninges, urogenital tract, peritoneum, skin, bones, etc
  • Usually occurs in immunocompromised individuals
  • Most commonly occurs w/ primary infection
    • Can also occur during reactivation
  • Focal sx may be absent ⇒ difficult to dx
  • PPD skin test often ⊖
  • Communicability of miliary TB relatively low
  • If lungs involved, CXR shows “miliary” pattern
  • Clinical manifestations:
    • Fever
    • Night sweats
    • Weight loss
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21
Q

Extrapulmonary TB

Meningitis

A
  • Indolent onset HA with systemic sx
  • CSF ⇒ PMNs early then lymphocyte predominance, low glucose, high protein
  • Imaging ⇒ enhancement of basilar meninges
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22
Q

Extrapulmonary TB

Renal Disease

A
  • Infection of renal parenchyma
  • Sx ⇒ dysuria, frequency, flank pain
    • Fever and systemic sx uncommon
  • Sterile pyuria ⇒ WBC in urine with no organisms
  • Organism frequently grows from urine if repeated AFB urine cultures performed
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23
Q

Extrapulmonary TB

Bone Disease

A
  • Spine affected in 50% of cases w/ bone involvement ⇒ Potts disease
  • Hips and knees less affected
  • Pts usually c/o pain
  • ± Fever
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24
Q

Extrapumonary TB

Local LN Disease

A
  • Most commonly occurs in children < 15 y/o
  • Can be caused by M. tuberculosis or M. scrofulaceum
  • Cervical lymph nodes most commonly involved ⇒ Scrofula
  • Dx ⇒ excisional biopsy or fine-needle biopsy
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25
Extrapumonary TB Other Sites
* GI tract * Pericarditis * Peritonitis
26
TB & HIV
* ↑ Prevalence of TB in HIV infection * All pts w/ TB need HIV testing and vice versa * **_Early HIV infection_** ⇒ presentation similar to immunocompetent host * Indolent onset of cough, fever, sweats * **Extrapulmonary manifestations in 10-15%** * CXR shows **upper lobe infiltrates ± cavitation** * **PPD usually ⊕** * **_Advanced HIV infection_** ⇒ atypical presentation * **PPD usually ⊖** * No immune response * CXR shows **lower lobe or diffuse infiltrates** * Cavitation rare * **Extrapulmonary disease in \> 50%** * Often occurs w/o pulmonary disease * **M. avium-intracellulare complex** ⇒ causative agent of **disseminated infection** in AIDS pts
27
Mycobacteria Immunity
* Grow uninhibited within non-activated MΦ early during infection * **Ingestion by MΦ** ⇒ innate immunity activation * Release IL-12, TNF-α, IL-6, IL-1 * **PMNs, MΦ, and T-cells recruited to site** * Lymphocytes activated in nearby lymph nodes * Can take 6-8 weeks * **T-cell mediated response** ⇒ containment and/or resolution * Releases IFN-𝛾 ⇒ activate MΦ * Activated MΦ can partially inhibit mycobacterial growth * **Activated MΦ ⇒ epithelioid cells ⇒ granuloma ⇒ walls off infected cells ⇒ fibrosis and calcification ⇒ tubercle formation** * Type IV hypersensitivity * **Immune response limits infection but damages lung** * Elimination vs immune injury varies w/ # of organisms present & strength of immune response
28
Tuberculosis Clinical Diagnosis
* **Hx of compatible sx in pt w/ potential exposure or risk factors** ⇒ high suspicion * Physical exam often nonspecific * Routine labs often nonspecific * May see normocytic anemia * May have elevated ESR * WBC count varies/may be normal
29
Tuberculosis CXR
**1° TB ⇒** lower lobe infiltrate ± Ghon complex **2° TB ⇒** upper lobe involvement ± cavity
30
Tuberculosis Dx Staining
* **⊕ Acid-fast smears only presumptive e/o TB** * False ⊕ can occur from environmental contamination * ~60% of positive cultures ⇒ ⊕ smears
31
Tuberculosis Dx Culture
**Definitive dx by culture isolation only** * Inoculated on _complex media w/ organic substances_ * Egg yolk, animal serum, tissue extracts * Often contain abx or malachite green to inhibit growth of other macteria * **Lowenstein-Jensen** (solid medium) ⇒ slow growth 3-8 wks * **Middlebrook 7H10** (liquid broth) ⇒ 1-3 weeks * Cannot grow all strains * Both cultures must be done
32
Mycobacteria Biochemical Tests
**Production of niacin** Distinguishes M. tuberculosis from atypical mycobacteria.
33
Nucleic Acid Amplification Techniques
**Rapid tests that ID M. tuberculosis in clinical specimens within a few hours.** * Sensitivity for smear ⊕ specimens very high * Sensitivity for smear ⊖ specimens ~ 45-75% * Must still perform culture for sensitivity testing * Technically complex and very expensive
34
IFN-𝛾 Release Assay | (IGRA)
**Measure in-vitro IFN-𝛾 response to specific Mtb antigens.** * Ag not present in non-tuberculous mycobaceria or BCG strains * Useful to screen individuals vaccinated with BCG * Blood test ⇒ only 1 visit * Technical complexity limits use
35
Tuberculin Skin Test | (TST)
* **Useful for dx and control of TB** * **⊕ Result ⇒ recent or past TB exposure** * _Have T-cells against AFB_ ⇒ Type IV DTH * No info on activity of disease * **Mantoux test** ⇒ most accurate and reliable * Intracutaenous injection of 0.1 ml of purified protein derivative (PPD) * **⊕ Rxn indicated by erythematous indurated area \> 5-10 mm** * See ⊖ results with infection in AIDS or other T-cell deficiencies ⇒ anergic * Requires pt to return for reading in 48-72 hrs * **Two-step TST testing** * See initial false ⊖ result d/t waning cutaneous immunity in remote infections * Can convert to ⊕ if 2nd TST w/in 2-3 weeks of initial test * Recommended for healthcare workers and elderly pts
36
Urine Cultures
30-40% of urine cultures may be ⊕ in case of extrapulmonary infections
37
Active TB Treatment Overview
* **High mutation frequency leads to drug resistance** ⇒ treat w/ multiple drugs simultaneously * Before abx sensitivity results available, treat according to risk for MDR infection * **Initially all pts treated with 4 drugs** * _Susceptibility results w/o MDR disease_ ⇒ change to **3 drugs** * _Susceptibility results with MDR disease_ ⇒ change to **5 drugs based on resistance** * Should have ⊖ sputum cultures in 85% after 2 months & 90-95% after 3 months * If sputum culture remains ⊕ after 3 months ⇒ consider non-adherence vs re-eval for resistance
38
TB Prevention
* _Purpose:_ * Prevent latent infection from progressing to clinical disease * Prevent initial infection * Prevent recurrence of past disease * Usual preventative therapy **⇒ isoniazid for 6 months in non-HIV pts** * May be composed of up to 3 drugs
39
TB Vaccination
* **Give Bacillus Calmette-Guerin (BCG)** * Attenuated strain of M. bovis * Used in several European and South American countries * **10-70% success rate in preventing TB infection** * **Effective in ↓ risk of miliary and meningeal forms of TB** * Results in ⊕ PPD test * IGRA preferred screening test
40
TB Infection Control
* **Respiratory isolation when TB suspected** * ⊖ Pressure room with doors closed * Providers use N95 masks * **Respiratory isolation during first 2 weeks of treatment for confirmed TB** * Contact tracing and screening programs
41
Mycobacerium Avium Complex | (MAC)
**M. avium-intracellulare** Common opportunist in immunocompromised pts esp. AIDS and transplant recipients. * Ubiquitous organism found in soil, fresh and salt water * **Not transmitted person to person** * Difficult to treat * More resistant to abx * Poor host immune status
42
Norcardia Overview
* _3 species cause human disease_ * **N. asteroides** ⇒ most common * **N. brasiliensis** * **N. cavae** * Found in soil * Transmission * **Inhalation** ⇒ pulmonary infection * **Direct inoculation into skin or subQ tissue** * Infection may disseminate hematogenously ⇒ many organ systems * Predilection for brain abscess formation
43
Norcardia Morphology
* **Gram ⊕** * **Partially acid-fast** * Have shorter myolic acid chains than Mycobacteria * **Filamentous** ⇒ looks like hyphal elements in tissue * Fragments ⇒ **bacillary or coccoid forms**
44
Norcardia Pathogenesis
* Morbidity attack rate ~ 500-1K cases/yr * **Non-communicable** * Inhalation of organisms ⇒ **lobar pneumonia** * Metastatic foci may involve the brain, kidney, or skin * **⊗ Lysosome-phagosome fusion**
45
Norcadia Pathological Features
* **Multiple abscesses w/ infiltration of PMNs and central necrosis** * Burrowing sinuses and granulomas are not characteristic
46
Norcardia Diagnosis
* Microscopic exam of sputum, skin lesions, and surgical materials * **Look for gram ⊕ branched filaments** * May mis-diagnose as TB * Grows on **normal media** over wide temp. range * **Incubate @ 40-50°C** ⇒ inhibit most other bacteria * Culture under **aerobic conditions**
47
Norcardia Treatment
Sulfonamides preferred
48
Isoniazid Indications
Part of drug combo for **active and latent TB** _Bactericidal_ against growing bacterial _Bacteriostatic_ against dormant bacteria
49
Isoniazid MOA
* Prodrug activated via oxidation rxn by mycobacteria enzyme **katG** (catalase-peroxidase activity) * Active compound: 1. **Acylates inhA enzyme** * Responsible for mycolic acid synthesis 2. **Acylates NADH dehydrogenase** * Needed to catalyze the rxn
50
Isoniazide Resistance
Due to mutation in KatG, inhA, or NADH dehydrogenase
51
Isoniazid Metabolism
Extensively metabolized to inactive compounds: * N-acetyltransferase converts to **N-acetylisoniazide** * Isozymes ⇒ rapid vs slow acetylators * May have to adjust dose for rapid type * N-acetylisoniazide ⇒ **N-acetylhydrazine** * Substrate for CYP-450 ⇒ reactive intermediates * Damages liver proteins ⇒ **hepatotoxicity** * Slow acetylators more prone d/t build-up of metabolites
52
Isoniazid Adverse Effects
* **Elevation of serum transaminase** * **Age-dependent hepatitis** * **Peripheral neuritis** * Due to Vit B6 (pyridoxine) depletion * Prevent w/ supplemental Vit B6 * **Drug-induced lupus in slow-acetylators**
53
Isoniazid Drug Interactions
* **Phenytoin toxicity in slow-acetylators** * Extra isoniazide inhibits hepatic microsomal enzymes
54
Ethambutol Indications
Used in combo to treat **active TB** & **M. avium-intracellular** _Bacterostatic_ @ low doses _Bactericidal_ @ high doses
55
Ethambutol MOA
**⊗ arabinosyl transferase ⇒ ↓ arabinogalactan synthesis** Enzyme adds arabinose units to arabinogalactan chain
56
Ethambutol Resistance
Via over-expression of arabinosyl transferase.
57
Ethambutol Metabolism
Majority excreted into urine unchanged
58
Ethambutol Adverse Effects
* **Optic neuritis** ⇒ blindness and/or vision impairment * Monitor visual acuity and color perception * **Impairs red-green color discrimination** * Eye exam required
59
Pyrazinamide Indications
* **Shortens duration of treatment when used in combo** * Some e/o activity against **non-replicating persistent mycobacteria** * **Bactericidal against even slow growing TB**
60
Pyrazinamide MOA
* **Pyrazinamide ⇒ pyrazinoic acid** by deamination by ***pyrazinaminidase*** * Transported to _extracellular compartment_ via **efflux pump** * _Protonated in acidic environment_ of phagolysosome * Protonated lipid soluble compound _re-enters mycobacterium_ * **⊗ fatty acid synthase type I ⇒ ⊗ mycolic acid synthesis** * May also work by **acidifying intracellular environment**
61
Pyrazinamide Resistance
Via mutations of pyrazinaminidase
62
Pyrizinamide Metabolism
Mostly hepatic metabolism
63
Pyrazinamide Adverse Effects
* **Hepatotoxicity** * Related to dose and length of treatment * Usu. when given for \> 2 months * **Hyperuricemia** * Due to inhibition of excretion * Monitor uric acid
64
Rifampin Indications
**Bactericidal** * _Used in combo to treat:_ * **Active TB** * **Mycobacterium leprae (Leprosy)** * **Legionella pneumophilia** (Legionnaire's disease) * _Used for prophylaxis:_ * **When isoniazid resistant** * **Where risk of hepatotoxicity is significant** * Exposure to Neisseria meningitidis * Exposure to Haemophilus influenza type b
65
Rifampin MOA
* **Binds β subunit of DNA-dependent RNA polymerase (rpoB)** * Forms stable drug-enzyme complex * **↓ chain formation in RNA synthesis** * Good penetration into tissues and TB lesions
66
Rifampin Resistance
**Due to alteration of DNA-dependent RNA polymerase (rpoB)** Resistance develops rapidly if used as a monotherapy.
67
Rifampin Metabolism
**Mostly hepatic metabolism** **Undergoes enterohepatic cycling** * Causes significant CYP-450 induction * Repeated admins will ↓ drug concentration
68
Rifampin Adverse Effects
* **Can impair liver function ⇒ hepatitis** * Alcohol ↑ risk * **Red-orange discoloration of urine, tears, and saliva** * **Hypersensitivity reaction common** * See flu-like illness w/ fever, chills, fatigue, and HA * **Multiple drug interactions** * Due to CYP-450 induction * **Can ↓ effectiveness of anticonvulsants, oral contraceptives, and other drugs**
69
Rifabutin
* Similar indications and MOA as rifampin * Less potent inducer to CYP-450 * **Used instead of rifampin to treat TB in HIV pts** * **Used for prevention and treatment of M. avium complex**
70
MDR-TB Medications
**Streptomycin and Amikacin** (aminoglycosides) • Given parenterally, not as convenient
71
TB Treatment Challenges
* Replicate more slowly * Can exist in a dormant state * Intracellular organisms
72
TB Therapy Principles
* Drug combos always given to minimize development of resistance * Also shortens duration of therapy * Meds must be taken regularly * Therapy must continue for a period sufficient to resolve the illness
73
Active Tuberculosis Treatment
* Confirm dx by culture and test for susceptibility * _Standard initial phase treatment_ ⇒ daily doses of "RIPE" 1. **Rifampin** 2. **Isoniazid** 3. **Pyrazinamide** 4. **Ethambutol or streptomycin** * _Once susceptibility shown_ ⇒ **ethambutol/streptomycin can be discontinued** * _After 2 months_ ⇒ **pyrazinamide stopped** * **Isoniazid and rifampin continued for 4 more months** * 2-3 times per week * **Rifabutin used in HIV pts for entire 6 month period** * Normal course of treatment lasts 6 months * Pts with other comorbidities will require prolonged treatment * **Sputum monitored weekly until no e/o TB**
74
Latent Tuberculosis Treatment
~10% develop active TB over lifetime s/p infection Must exclude active disease before treatment for latent TB * _Candidates for prophylaxis_ * **Known exposure to someone with active TB until ⊖ TST** * **Pts who recently converted to ⊕ TST** * **⊕ TST w/ risk for progression from latent to active TB** * _Possible drug regimens_ * **Isoniazid (INH) 300 mg/d x 6-9 months** * **Rifampin (RIF) daily for 3-4 months** * **Weekly isoniazid + rifapentine for 3 months** * Only with directly observed treatment (DOT)
75
Drug-resistant TB
* Improper drug use ⇒ resistance * **17% of newly dx TB cases resistant to 1 or more first-line agents** * Isoniazide most common (10%) * Treat longer with drugs that are active * **Multidrug-resistant TB (MDR-TB)** ⇒ caused by organism that is resistant to at least isoniazid and rifampin * **Extensively drug resistant TB (XDR-TB)** ⇒ caused by organism resistant to isnoiazid, rifampin, and other drugs * Fluoroquinolones and one of Amikacin, Kanamycin, Capreomycin
76
Mycobacterium avium-intracellulare Treatment
* Must determine if disease actually present or part of environmental contamination * _Triple therapy for newly dx patients_ ⇒ administered 3x/week and 12 months after last negative culture (Put your MAC to REM sleep) 1. **Rifampin** 2. **Ethambutol** 3. **Macrolide ⇒ charithromycin or azithromycin** * **Azithromycin used for prophylaxis in immunocompromised pts**
77
Mycobacterium leprae Treatment
* ↓ Prevalence worldwide since WHO provided free multidrug therapy * _Therapy depends on severity of disease_ * **Tuberculoid leprosy (paucibacillary)** * Bacterial burden low * Only 2 drugs recommended 1. **Dapsone** 2. **Rifampin** * **Lepromatous leprosy** * Most severe form * Requires 3 drugs 1. **Dapsone** 2. **Rifampin** 3. **Clofazimine (orphan drug)** * Treatment is for 2-5 years
78
Dapsone Indications
**Used primarily to treat leprosy.** May be used for other indications.
79
Dapsone MOA
* **Competitive ⊗ of dihydropteroate synthase** * Analogue of para-aminobenzoic acid * Similar to sulphonamides ⇒ wide spectrum of activities * Antibacterial * Antiprotozoal * Antifungal
80
Dapsone Metabolism
* Retained up to 3 weeks in skin, muscle, and esp. liver & kidney * **Primarily metabolized in the liver** * **70-85% slowly excreted in urine** * **Enterohepatic recirculation** of free drug prolongs half-life
81
Dapsone Adverse Effects
* **Severe hemolysis in pts with G6PD deficiency** * Skin rashes * Reversible peripheral neuropathy * Blurred vision
82
Mycobacteria Drugs Summary