Major Facilitator Superfamily Flashcards

1
Q

What kind of transport does the major facilitator superfamily do?

A

Passive or secondary active transport

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2
Q

What functions does the major facilitator superfamily complete?

A
  • Nutient Uptake
  • Signal transduction
  • Drug and noxious compound extraction
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3
Q

Name a member of the major facilitator superfamily

A

Lactose Permease

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4
Q

Where is lactose permease found?

A

In the cytoplasmic membrane of bacteria

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5
Q

What is the function of lactose permease?

A

It transports lactose into the cell when the concentration of glucose is low

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6
Q

What forms the substrate binding pocket of lactose permease?

A

Network of hydrogen bonds from charged residues

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7
Q

Which amino acid is particularly important in binding sugars?

A

Tryptophan

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8
Q

Why is tryptophan particularly important in binding sugars in lactose permease?

A

Because the sugar ring is able to stack on the tryptophan sidechain

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9
Q

How is lactose permease powered?

A

By translocating H+ from the periplasm to the cytoplasm down a concentration gradient, producing an electrochemical gradient

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10
Q
A
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11
Q

Where is the lactose transported from and to?

A

From periplasm to the cytoplasm

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12
Q

Why are His, Asp, and Glu likely to be involved in the proton pathway of lactose permease?

A
  • Can be reversibly protonated
  • pKa around physiological pH
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13
Q

What does the lac permease face in the outward conformation?

A

Periplasm

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14
Q

Where does the lac permease face in the inward conformation?

A

Cytoplasm

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15
Q

Does H+ or lactose bind first

A

H+

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16
Q

What happens once H+ and lactose have both bound to the lac permease?

A

The transporter undergoes a conformational changes where it flips from an out to inward conformation

17
Q

In the outward conformation of lac permease there is a hydrogen bond between which amino acids?

A

R144 and E126

18
Q

In the outward conformation of lac permease H+ is bound to which amino acid residue?

A

E269

19
Q

In the inward conformation of lac permease H+ is bound to which amino acid residue?

A
20
Q

In the inward conformation of lac permease there is a hydrogen bond formed between which two amino acids?

A

R144 and E269

21
Q

What is the effect of changing conformation from outwards to inwards in lac permease on affinity for lactose?

A

Causes the lactose binding site to go from a hugh affinity to a low affinity

22
Q

What is the purpose of the conformational change decreasing the affinity of the lactose binding site in lac permease?

A

It allows the lactose to be released

23
Q

Once lactose has been released what happens to lac permease?

A

H+ comes off and the inward facing unbound transporter flips back to become outward facing

24
Q

What does the confomational change from outward to inward of lac permease require?

A

Both H+ and Lactose to be bound

25
Q

What regulates H+ affinity in lac permease?

A

Changes in the pKa’s of residues

26
Q

What modulates ligand affinity in lac permease?

A

Changes in binding site conformation

27
Q

What is the main function of GLUT 1 transporters?

A

Uptake of glucose from blood to cells

28
Q

What kind of transporter is GLUT1?

A

A passive uniporter

29
Q

What is GLUT1 composed of?

A

Bundles of transmembrane alpha helices

30
Q

What transporter has a very similar structure to GLUT1?

A

bacterial xylose:H+ symporter

31
Q

What is mapping of mutations in transporters useful for?

A

Designing drugs