M1: Virus Viroids Prions & Fungi Flashcards
A complete infectious particle combing these structural elements. Can be envisioned as a delivery system that surrounds a nucleic acid payload.
Virion
Infectious particles. Acellular. Not considered living organisms. DNA or RNA, never both. They are obligate intracellular parasites.
Viruses
Infectious agents that are minimally constructed of two components. ______ either RNA or DNA but not both.
Viruses. Genome
Two components of Viruses
Genome & Capsid
A protein containing structure designed to protect the genome
Capsid
Viruses in coconut
Kadang kadang
Obligate intracellular parasites of plants. Acellular. Naked RNA. No human diseases known.
Viroids
Infectious protein composed entirely of protein which cause transmissible spongiform encephalopathies. Highly resistant to inactivation. Do not elicit an inflammatory response or an antibody response.
Prions
Prions: pathogenic
Beta pleated sheet
Prions: non pathogenic
Alpha helix
Prions are infectious proteins: cellular form of the protein ______ is encoded by the host’s chromosomal DNA.
PrP
Prions are infectious proteins: is susceptible to protease and soluble in detergent
PrPc
Same AA, different protein
Conformers
Prions are infectious proteins: abnormal _________ modify folding of normal prion like proteins found in the body (code by human genes) and has high beta sheath content.
Isoform PrPsc
Present with cereberal problems
Kuru (kuria/guria)
Presenting symptoms are like dementia
Creutzfeldt Jakob Disease
Appearance of the vacuolated neurons as well as their loss of function and the lack of an immune response or inflammation
Spongiform encephalopathies
Human prion diseases
CJD, Kuru, vCJD, GSS syndrome, FFI & Sporadic Fatal Insomnia
Also known as mad cow disease
Bovine spongiform encephalopathy
Impervious to standard viral disinfection procedures. Very long incubation periods. As long as 30 years.
Animal prion disease
Animal prion diseases
Scrapie, Transmissible milk encephalopathy, BSE & chronic wasting disease
From sheep and goats
Scrapie
From mule, deer & elk
Chronic wasting disease
Transmission of prions through cut in skin, transplantation of contaminated tissues, use of contaminated medical devices and ingestion of infected tissue.
Infected tissue
Susceptible population in prion’s disease
Women & Children of Foretribe in New Guinea, Neurosurgeon, transplant and patients
Progressive neurodegenerative disease. Loss of muscle control, shivering, myoclonic jerks, loss of coordination, rapidly progressive dementia and death.
Prions
Treatment for Prions
No available
Type of nucleic acid found in the virus particle is perhaps the most fundamental and straightforward of viral properties
Viral genome
Most common forms of viral genomes found in nature
ssRNA & dsDNA
DNA viruses
Hepadna, Herpes, Adeno, Pox, Parvo, Polyoma & Papilloma “HHAPPPPy”
RNA viruses
Coronavirus, Calicivirus, Hepevirus, Picornavirus, Flavivirus, Retrovirus & Togavirus “CCHeaP FaRT”
Range in size from 20-300nm. All have protein coat (capsid). Composed of repeating capsomeres. In some, covered with lipoprotein envelope.
Viral structure
Nucleic acid + capsid
Nucleocapsid
Shape Viral symmetry
Spherical (Icosahedral) or Helical
Are enveloped
Helical viruses
Can be enveloped or naked
Icosohedral viruses
Attachment to host cell receptors
Surface proteins
Interaction between nucleocapsid and envelope
Matrix protein
Evasion of host defenses
Antigenic (serotypic) variants
Lipid containing membrane surrounding the nucleocapsid.
Viral envelope
Acquired as the virus exits from the cell in a process called
Budding
All enveloped viruses acquire their enveloped viruses from plasma membrane except
Herpesvirus
Herpesvirus are from
Nuclear membrane
Are less stable and more easily inactivated
Enveloped viruses
Naked Viruses
Calici, Picorna, Reo, Parvo, Adeno, Papilloma & Polyoma “CPR PAPP”
All DNA viruses have double stranded DNA except
Parvovirus
All DNA viruses have linear DNA except
Papilloma, Polyoma & Hepadna
All DNA viruses are icosahedral except
Poxvirus
All DNA viruses replicate in the nucleus except
Poxvirus
All RNA viruses have single stranded RNA except
Reovirus & Rotavirus
All RNA viruses replicate in the cytoplasm except
Influenza & Retrovirus
All viruses are haploid except
Retroviruses
Contain either DNA or RNA but not both. Genomes can either be single or double stranded. Genomes can either be positively or negative polarity. Some RNA viruses have a segmented genome.
Viral genome
Segmented Genome
Bunyaviruses, Orthomyxoviruses(Influenza), Arenaviruses & Reoviruses “BOAR”
Must transcribe negative strand to positive.
Negative stranded RNA viruses
Brings its own RNA dependent RNA Polymerase
Virion
Negative stranded RNA viruses
Arenaviruses, Bunyaviruses, Paramyxoviruses, Orthomyxoviruses, Filoviruses & Rhabdoviruses “Always Bring Polymerase Or Fail Replication”
Distinguished from all other RNA viruses by the presence of an unusual enzyme, ____________ which converts a single stranded RNA viral genome into double stranded viral DNA.
Retroviridae. Reverse transcriptase.
Can produce antigenic, drug resistant or attenuated variants.
Mutations
Causes epidemics. Influenza viruses.
Genomic reassortment
One virus produces a protein that can be used by another virus. Example is hepatitis D & B.
Complementation
Two different viruses infect the same cell
Phenotypic mixing
Slow and progressive change in the antigenic composition of MO. Altered immunological responses and susceptibility.
Mutation Antigenic Drift
Sudden change in the molecular structure of MO. New strains. Little or no acquired immunity to these novel strains. New epidemics or pandemics.
Antigenic shift
Following initial attachment, the ability of a virus to infect other cells disappears.
Eclipse period
For a period of time, then reaches a plateau after which no additional increase in virus yield occurs.
Exponential growth
Visual or functional change in infected cells
Cytopathic effect
Oncogenic viruses induce transformation and unrestrained growth
Malignant transformation
Infected cells appear normal, but are producing large numbers of progeny virions
Commensal symbiosis
Bind cytokines and block their ability to interact with receptors on their intended targets
Cytokine decoys
Reduces the expression of antigen presenting cells and inactivate complement
Virokines
Of surface proteins
Antigenic variants
Produces virus for long periods of time. Can serve as a source of infection for others.
Carrier state
Not producing virus at the present but can be reactivated at a subsequent time
Latent infections
Low incubation period often measured in years
Slow virus infections
Finding antibody in one who previously had none
Seroconversion
Can be used to diagnosed current infection
Presence of IgM
Cannot be used to diagnose current infection. Antibody may be due to an infection in the past.
Presence of IgG
Gold standard in viral diagnosis
Presence of viral DNA or RNA
Eukaryotic ( true nucleus, 80s ribosomes, mitochondria) Complex carbohydrate cell walls: chitin, glucan & mannan.
Fungi
Major membrane sterol
Ergosterol
Inhibit ergosterol synthesis
Imidazole antifungals
Bind more tightly to ergosterol than cholesterol
Polyene antifungals
Fungi require organic carbon
Heterotrophic nutrition
Living on dead organic material (DOM)
Saprophytic/Saprobic
Fungus living on another organism
Parasitic
Thermal dimorphism. Two basic forms of Fungi.
Molds & Yeasts
Single cells & budding
Yeast
Hyphae & Mycelia. Mitosis.
Molds
Septate hyphae
Transverse walls
Nonseptate hyphae
Multinucleated
Two types of host response
Granulomatous & Pyogenic responses
Some can be detected by using this for delayed hypersensitivity reaction
Skin tests
Predisposes to disseminated disease
Reduce cell-mediated immunity
Fungal Toxins & Allergies: liver necrosis due to amanitin & phylloidin
Amanita mushrooms
Fungal Toxins & Allergies: ingestion of contaminated peanuts and grains causes liver cancer due to aflatoxin
Aspergillus flavus
Fungal Toxins & Allergies: inhalation of the spores causes allergic bronchopulmonary aspergillosis (IgE mediated)
Aspergillus fumigatus
Dissolves human cells allowing visualization
Microscopy of KOH preparation
Low pH inhibits the growth of bacteria
Saboraud’s agar
For early infection. Tests for fungal antigens or antibodies to fungal antigens.
DNA probes
Infect only superficial keratinized structures. Transmission is thru direct contact (dogs & cats)
Dermatophytoses
Three Important dermatophytes
Microsporum canis, Epidermophyton floccosum & Trichophyton tonsurans “MET”
Athletes foot
Tinea pedis
Jock itch
Tinea cruris
Superficial skin infection of cosmetic importance. Hypopigmented areas. Spaghetti and meatballs appearance on 10% KOH.
Malasezzia furfur (Tinea Versicolor)
Dimorphic fungus that lives on vegetation. Occurs most often in gardeners, especially those who prune roses. Transmission is thorn prick.
Sporothrix schenckii (Sporotrichosis)
Arthrospores form spherules filled with endospores. Granulomata in bones & CNS. Dissemination in those who have defective CMI.
Coccidioides Immitis
Inhaled microconidia develop into budding yeast inside macrophages. Spreads to liver and spleen. Dissemination in those who have defective CMI.
Histoplasma Capsulatum
Chronic PNA. Ulcerated granulomas. Lytic bone lesions. Prostatitis.
Blastomyces Dermatidis
Chronic PNA. Painful ulcers on mouth & nose.
Paracoccidioides Brasiliensis
Oral trush, vulvovaginitis, intertrigo, skin infections & onychomycosis
Candida Albicans Immunocompetent
Esophagitis, subcutaneous nodules & right sided endocarditis
Candida Albicans Immunocompromised
Curd like discharge
Vulvovaginitis
Skin infections
Satellite lesions
Asymptomatic lung infection. Meningitis. Encephalitis.
Cryptococcus neoformans
Infections. Aspergilloma (fungus ball) in lung cavities.
Aspergillus fumigatus
Asthmatic symptoms with expectoration of brownish bronchial plugs
Allergic Bronchopulmonary Aspergillosis (ABPA)
Saprophytic molds with nonseptate hyphae with walls and branches at right angles. Rhino-orbital cerebral infection with eschar formation. Patients with diabetic ketoacidosis, burns or leukemia.
Rhizopus oryzae & Mucos spp. (mucormycosis)
Are heterotryphic, non photosynthetic organisms. Can cause disease in the immunocompetent more so in the immunodeficient individual.
Fungi
Is directed at inhibiting structures unique to fungi minimize the risk of adverse effects on human cells
Antifungal therapy