lecture10a Flashcards
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Response elements
DNA sequences bound by complex of steroid bound to its receptor/ part of promoter of gene
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GRE
glucocorticoid response element
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ERE
estrogen response element
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VDRE
vitamin D response element
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TRE
thyroid hormone response element
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RARE
retinoic acid response element
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GRE sequence
top 5’AGAACA(N)3 TGTTCT 3’ bottom 3’TCTTTGT(N)3 ACAAGA5’
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ERE sequence
top 5’AGGTCA(N)3 TGACCT 3’ bottom 3’TCCAGT(N)3 ACTGGA5’
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VDRE sequence
top 5’AGGTCA(N)3 AGGTCA3’ bottom 3’TCAAGT(N)3 TCCAGT5’
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TRE sequence
top 5’AGGTCA(N)4 AGGTCA3’ bottom 3’TCCAGT(N)4 TCCAGT5’
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RARE
top 5’AGGTCA(N)5 AGGTCA3’ bottom 3’TCCAGT(N)5 TCCAGT5’
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T3 ligand independent repression
if no T3; CoR binds to RXR/THR heterodimer bound to positive TRE and represses gene expression
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T3 ligand dependent transactivation
if T3 binds; RXR/THR binds CoA and activates gene expression
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where is T4 converted to T3
liver and thyroid
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what coverts T4 to T3 in liver
D1
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what inactivates T3
D3; and turns it into rT3 and T2
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what happens to T4 once it enters cell
it gets converted to T3 by D2
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What happens to T3 once in cell
it translocates into nucleus; binds to RXR/TR heterodimer bound to TRE and activates gene expression with bound activator
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What corepressors compete to bind with heterodimer?
NCor1; RAR; PPAR; VDR
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What coactivators compete to bind with heterodimer
P160/SRCS and TRAP 220; nuclear receptors AR; ER; RAR; GR; VAR; PPAR
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Does TR form dimer with RR?
yes
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What does TR bind to?
TRE located on promoter of T3 target genes
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If there is no T3; what does TR bind to?
TRE. Represses basal transcription.