Lecture Exam 1 Flashcards
Anatomy
Structure, how things look
Levels of Anatomy
- Gross Anatomy
2. Microscopic Anatomy
Gross Anatomy
The level of anatomy that you can see with your eyes
Example of Gross Anatomy
Cadaver labs
Microscopic Anatomy
Below the level of what you can see with your eyes
Examples of Microscopic Anatomy
- Cytology: Study of cells
2. Histology: Study of tissues
What is cytology used for
Pathologists use cytology to tell if something looks normal or abnormal
Physiology
Function, what it does
What determines the other?
The Anatomy determines the Physiology
- Structure determines the function
- This rule holds true at all levels of Anatomy
Hierarchy of Life
- Molecular/Chemical Level
- Cellular Level
- Tissue Level
- Organ Level
- Organ System
- Organism
Example of Molecular/Chemical Level
Atoms
Cellular level
Molecules that are formed together
Example of tissue level
Histology
Tissue Types
- Epithelial (Found in skin)
- Muscle
- Connective
- Neural
Organ level
Multiple tissues that come together
Example of organ level
Heart
How many organ systems do we have
11
Example of organ system
Digestive system
Example of organism
Humans
What is the function of the organism
To maintain homeostasis
Homeostasis
Having a stable internal environtment
Things to keep in homeostasis
- Body temperature
- pH of body and blood
- Blood pressure
- Heart rate
- Respiratory rate
- Water
- Blood sugar
- Sodium
- Potassium
What would happen if you took your temperature every morning for a month
It would have a wavy line on a graph because it changes all the time
Static equilibrium
If your body temperature stayed the same
Dynamic equilibrium
Not the same everyday (changes). There is a range that is accepted
Why do you shiver?
Muscle contractions heat you up
Ways to Maintain Homeostasis
- Autoregulation
2. Extrinsic regulation
Autoregulation
Regulation without help
Examples of autoregulation
Stomach
- Food puts off homeostasis, so it undergoes homeostasis to digest it
Running
- Blood to the heart increases by itself
Extrinsic regulation
Regulation with help
Where does the help for extrinsic regulation usually come from
Neural and endocrine systems
Types of Extrinsic Regulation
- Feed-forward
2. Feed-back
Feed-forward
The ability to predict a change in homeostasis and begin to prepare for it before it happens
Examples of feed-forward
Your hungry and walk past a restaurant, your stomach growls, then it makes acid and enzymes to prepare for food
Runners that run at the same time everyday have bodies that get ready to run by increasing respiratory rate and heart rate
Types of Feedback (Loops)
- Positive feedback loop
2. Negative feedback loop
Positive feedback loop
Body’s response to stimulus is to exaggerate that stimulus; Used in situations where the only way to get back to homeostasis is to push through as fast as possible
Examples of positive feedback loops
Low body temperature.
Body’s response is to make it lower
Labor and Delivery
- Stimulus is cervical stretch
- Body responds by making oxytocin (by the hypothalamus)
- Oxytocin causes cervix to stretch
- Pitocin (being induced) speeds up positive feedback loop; oxytocin
Negative feedback loop
Body’s response to a stimulus is to revert the stimulus; The most important/most common type of regulation
What is the body’s first response to a stimulus
Recognizing the stimulus
Receptors
Recognizes a stimulus and sends information to the integration center
Integration center
(The brain, usually) Takes in information and determines if a response is necessary; If a response is necessary it sends information to the effector
Effector
Acts on the stimulus (exaggerates or counteracts)
Types of macromolecules
- Proteins
- Lipids
- Carbohydrates
- Nucleic acids
Macromolecules
Organic; which means that it has carbon
What looks just like carbon
Silicon
What is unique about carbon?
The carbon bonds can twist and go from something long and linear and make them into rings
Macromolecules are
Polymers
Polymers
Big structures that are made from smaller individual units
Monomer
Individual units that make a polymer
What is the monomer that is used to make proteins?
Amino acids
How many amino acids are in our body?
At least 20
What makes amino acids different from each other?
Different R group
Pieces of an Amino Acids:
- Amino group
- Central carbon
- Carboxyl group
- R group (variable side chain of one or more atoms)
What is dependent on the R group
The chemical properties of an amino acid
How do you link 2 amino acids?
By freeing up a bond on both amino acids and then linking the carboxyl group to the amino group
Every atom has a limited
Amount of bonds it can make
Peptide bond
A strong covalent/chemical bond that links amino acids by linking a carboxyl and amino group
What does the digestive system do with peptide bonds?
It breaks it down so that we can absorb it
Dehydration synthesis
When the amino acid loses a molecule of water to make a peptide bond
Hydrolysis
The opposite of dehydration synthesis; When you add a molecule of water to break down a peptide bond
Protein Structures:
- Primary structure
- Secondary structure
- Tertiary structure
- Quaternary structure
Primary structure
Chain of amino acids that are all linked together by peptide bonds that is not functional
What must happen for a protein to be functional
It must turn into a 3D structure
Secondary structure can either be in the form of:
- Alpha-helix
2. Beta-sheets
What is the driving force of the secondary structures?
The formation of hydrogen bonds; which are weak bonds
Secondary structures can be a
Combination of alpha-helix and beta-sheet structures
Hydrophobic interactions
The process that makes tertiary structures because the hydrophobic amino acids coil together and hydrophilic amino acids go towards the water on the outside; this is now a functional protein
Quaternary structure
Two or more tertiary structures that have come together
A protein is only functional if
It folds into the correct shape
Example of mutation of protein strucuture
Sickle cell anemia: An inherited mutation of hemoglobin where one amino acid is changed. This messes with the hydrogen bonds and the structure/shape
Catalyst
Anything that speeds up a chemical reaction but is not used up in the reaction
Activation energy
Energy that is needed to get a chemical reaction moving
Example of activation energy
Stirring sugar in water
Enzymes
Protein catalysts that our body uses that can be reused over and over
What is the function of enzymes
To make chemical reactions happen fast enough to maintain life
Process of an enzyme:
- Substrates bind to active sites on enzyme
- Substrates are held together and the enzyme bonds them to promote a product being made
- Product leaves and the process can happen again because the enzyme can be reused
Active site
Pockets that are formed from the what that the protein forms
What do enzymes do
Lower the amount of activation energy required
Factors that influence enzyme activity
- pH
2. Temperature
Every enzyme has an…
Optimal temperature
When do enzymes not work as well
- Colder temperature
2. Hotter temperature
What happens to enzymes in colder temperatures
They slow down
What happens to enzymes in hotter temperature
It denatures
Denature
The 3D structure breaks down and it reverts to its primary structure
What happens when an enzyme denatures
The hydrophobic amino acids go into the water and are unprotected
Example of denature of a protein/enzyme
Eggs: When they are cooked, the protein in them breaks down and it turns from clear to white
Salivary amylase
An enzyme that degrades carbohydrates; found in saliva; works best as around pH 7, when food is swallowed it doesn’t work well
Pepsin
An enzyme in the function that has an optimal pH of about 2; shows that enzymes need a specific environment
2 ways a drug can block an enzyme
- Competitive inhibition
2. Non-competitive inhibitions
Competitive inhibition
Drug fits into the active site of enzyme so that the substrate cannot bind to the active site
- Whoever “wins” depends on whichever there is more of (competing for enzyme active spot)
Non-competitive inhibitions
Drug binds to other part of enzyme which causes the enzymes active site to change shape, blocking substrate. Does not matter how much substrate/drug there is
What does homeostasis do for enzymes
It creates the perfect environment for the enzymes
What is the inside of the plasma membrane
Cytoplasm
What is the outside of the plasma membrane called
Extracellular part
What separates the outside and inside region
The plasma membrane
Importance of the plasma membrane
- Gives physical isolation
2. Provides a chemical boundary
How does the membrane help with the internal conditions of the cell
It establishes conditions within the cell that are optimal for metabolism
What is the main function of the plasma membrane
It is the ultimate gatekeeper, it determines what gets in and out of the cell
What are the major structures of the plasma membrane
- Phospholipids
- Proteins
- Cholesterol
Major parts of phospholipids
- Lipid tails/fatty acid chain/hydrocarbon chain
- Glycerol (tails are attached to this)
- Phosphate group
Hydrocarbon chain
Means it is made of carbon linked together and hydrogens that soak up the electron
Most lipids are
Hydrophobic
Phospholipids are
Amphipathic
Amphipathic
Parts of the molecule are hydrophobic and parts are hydrophilic
Three ways phospholipids organize
- Hydrophilic heads on water surface, tails sticking out
- Circle with hydrophilic heads on the outside, tails are protected on the inside
- Bilayer
Bilayer
The plasma membrane is a phospholipid bilayer
What molecules pass through the plasma membrane freely
Hydrophobic
Two classes of proteins
- Integral protein: Spans the entire plasma membrane bilayer
- Peripheral protein: On the inside, does not span the lipid bilayer
What is the importance of proteins in the plasma membrane?
They facilitate membrane transport, the hydrophilic molecules move through these protein channels
The plasma membrane is
Fluid, or always moving
Fluid-mosaic model
Describes the moving plasma membrane
What is the purpose of cholesterol?
To control the fluidity or movement of the plasma membrane
How things move in and out of the cell
- Simple diffusion
2. Facilitated diffusion
What do you need for simple diffusion to occur?
A concentration gradient
Concentration gradient
Different amounts of concentration
- Things always move down the gradient, from high to low
Brownian motion
Things are always moving, making things collide and bounce off of each other, causing diffusion
What molecules move through the plasma membrane through simple diffusion
Small, hydrophobic molecules
What molecules use facilitated diffusion
Large, charged molecules because they are hydrophilic
Aquaporins
Pores that move water through facilitators back and forth across the plasma membrane
Osmosis
Movement of water across a selectively permeable membrane
Osmotic pressure
The higher the solute concentration, the higher the osmotic pressure. The side with the more solute has osmotic pressure. This describes the amount of pull that a solution has on water
Example of osmotic pressure
- High osmotic pressure is needed by kidneys to pull water out of urine
- Small intestine pulls water out of food waste, so it needs high osmotic pressure
Tonicity
Describes the effect that a solution has on a cell
Isotonic
Describes a solution that has solute that matches the inside. Water moves in and out for every water molecule that goes out, another goes in, creating equilibrium
Hypotonic
Less solute in the solution than inside the cell, or more solute inside the cell than the outside (it is plump)
Example of something hypotonic
Water
Hypertonic
More solute outside the cell than inside
Active transport
Moves things against the concentration gradient, from low to high; requires energy because it is not “natural”
Sodium-potassium exchange pump
There is more sodium outside than inside the cell, and more potassium inside than outside; They are moved against the concentration gradient using ATP
Secondary Active Transport
The concentration gradient of one substance provides the driving force needed to give the second substance a free ride
Glucose-sodium transporter
There is more glucose inside the cell than outside, so to get glucose inside the cell it gets a free ride from the concentration gradient of sodium that is coming in; uses no energy
What will happen to sodium over time if it only uses the glucose-sodium transporter?
It will reach equilibrium and stop moving down its gradient and stop glucose coming into the cell
How does sodium not reach equilibrium?
It uses both the sodium-potassium pump and the glucose-sodium transporter
Why is it called the secondary active transport?
Because it happens after the sodium-potassium pump and is dependent on it
How many transporters do we have?
A limited amount, making there be a limit to the rate of transport that can occur
As the concentration gradient gets larger (ex. More sodium on one side)
The rate of transport gets faster
Why does the rate of transport stop getting faster?
Because we have a limited number of transporters and they are all being used
What happens to blood that goes into the kidney tubules
Blood goes into kidney tubules, then waste is removed and urine is produced. Good things go into the tubules, like glucose, but you don’t want it to go into your urine, so the glucose transporters take out the glucose before it reaches the end and turns into urine
Vesicular transport
Materials are moved in or out of the cell using vesicles
Types of vesicular transport
- Endocytosis
2. Exocytosis
Endocytosis
Membrane makes a “bud” and pulls something in after it pinches off into the cell
Types of endocytosis
- Pinocytosis
- Phagocytosis
- Receptor mediated
Pinocytosis
Constantly randomly testing fluid from the environment that can be useful or useless
Phagocytosis
Pulls in specific things by reaching out and capturing things from the environment
Receptor mediated
Extremely specific because it has receptor proteins that have active sites that are specific for binding to molecules
Exocytosis
Molecules are removed from the cell into the extracellular environment by using a vesicle, removing the molecule, and then becoming part of the membrane; exact opposite of endocytosis
Carbohydrates
Organic (meaning they are made of carbon) sugars that are used to make energy (ATP)
Monosaccharide
The monomers for carbohydrates; a single sugar
Types of monosaccharides
- Glucose
- Fructose
- Galactose
Disaccharide
Two monosaccharides put together; two sugars
Two examples of disaccharides
- Glucose + fructose = sucrose
2. Glucose + galactose = lactose
Polysaccharide
Many monosaccharides put together
Examples of polysaccharides
- Glycogen: Many glucose monomers (molecules) put together that is used to store carbohydrates
- Cellulose: A polysaccharide made by plants that humans cannot break down
Dehydration synthesis
Joins two molecules together (to make di- and poly- saccharides) by the removal of a water molecule
Hydrolysis
Breaks down the complex sugars by adding a water molecule
Types of lipids
- Fatty acid
- Triglyceride
- Phospholipid
- Steroid
Fatty acid
Hydrocarbon chain, long carbon chains that have hydrogen that soak up the electrons; has a carboxyl group attached
Fatty acid function
Energy, ATP
How do fatty acids help the body with ATP/energy
If glucose is low, our body can make ATP from lipids
What is the exception to lipids making energy
Neural system doesn’t use lipids very well, needs glucose
How do fatty acids compare to glucose
Compared to glucose, fatty acids can store more energy because glucose is hydrophilic and needs to be stored with water, but lipids are hydrophobic and can be stored without water
How are carbon molecules in lipids linked together
Covalent bonds
Saturated
Lipid where every carbon linked with one covalent bond
Unsaturated
Lipid where there is a double covalent bond, has a kink in the structure
What type of lipid is able to be stored more efficiently and easily?
Saturated lipids; they are straight and easier to pack together
Triglyceride
3 fatty acids (tri) that are connected with a glycerol (glyceride)
How are the fatty acids attached to glycerol and broken down
Hydrolysis; adds a water molecule to bond the fatty acids with glycerol
Dehydration synthesis; takes away a water molecule to break down the triglyceride
What cells store triglycerides?
Adipocytes
Triglyceride function
Energy, used to store fatty acids (they are stored as triglycerides), insulation, protection
Phospholipid
2 fatty acids attached to a phosphate group; amphipathic
Phospholipid function
Used in the plasma membrane to create a phospholipid bilayer and protect the hydrophobic parts (heads are hydrophilic, tails are hydrophobic)
What do unsaturated lipids and saturated lipids do to the plasma membrane
To decrease fluidity, you make the membrane more saturated and to increase fluidity you make the membrane more unsaturated
Steroid function
Used for communcation
Why do steroid lipids all look the same
Because they are made from cholesterol
Cholesterol (lipids)
The building block of steroids and is modified to make different types
Types of steroids
- Estrogen (puberty; menstrual cycle)
2. Testosterone (puberty; makes you either male or female)
Nucleic acids function
Used to store information
Types of nucleic acids
- DNA
2. RNA
What kind of information does DNA and RNA store?
Information to make a protein
Nucleotide
The monomer of nucleic acid
Parts of a nucleotide
- Sugar group (different for DNA and RNA)
- Phosphate group
- Nitrogenous base (Makes nucleotides different from one another)
Deoxyribose
The sugar in DNA
Ribose
The sugar in RNA
2 classes of nitrogenous bases
- Purines (1 ring)
2. Pyrimines (2 rings)
Purine bases
- Adenine
2. Guanine
Pyrimine bases
- Cytosine
- Thymine
- Uracil
Nitrogenous bases in DNA
- Adenine
- Guanine
- Cytosine
- Thymine
Nitrogenous bases in RNA
- Adenine
- Guanine
- Cytosine
- Uracil
How are nucleotides linked together to form a polymer?
Phosphodiester bond
Phosphodiester bond
The phosphate bonds with the sugar group to form this covalent bond that links nucleotides together
What holds the two bases on each strand together?
Hydrogen bonds; weak
Why are the hydrogen bonds weak?
So that they can be pulled apart and replicated
DNA strands are
Complimentary
Why is it important that DNA is complimentary
In replication when the enzyme is reading one strand, it knows that the other side is exactly the same/opposite bases
What is the shape of DNA
Double helix