Lecture 5: Phenotype, Genotype, and Variation Flashcards

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1
Q

Define phenotype

A

The physical appearance or attributes of an organism

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2
Q

Define genotype

A

genetic make up of an individual

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3
Q

Define dominance

A

one allele determines the phenotype of the diploid genotype

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4
Q

Define recessive

A

one allele is ‘masked’ in its expression pf phenotype (by dominant allele)

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5
Q

Define co-dominant

A

the heterozygote is intermediate between the two homozygotes

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6
Q

What is Wiesman’s doctrine

A

sequestration of the germ line

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7
Q

What are the types of mutations?

A
  • Point mutations
  • Deletions
  • Duplications
  • Inversions
  • Translocations
  • Transposable (mobile) elemnts
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8
Q

What are the four types of point mutations? And what type of change it it?

A
  • Synonymous (no amino acid change)
  • Nonsynonymous (changes amino acid)
  • Transitions (purine-purine or pyr-pyr)
  • Transversion (purine-pyrimidine
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9
Q

What is the significant of mutations?

A

They can create new genes by inverting different portions or removing a stop codon, etc . This then causes variation among different populations.

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10
Q

Define phenotype plasticity

A

The ability of one genotype to produce more than one phenotype when exposed to different environments.

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11
Q

What are the different ways to measure variation?

A
  • Resemblance among relative
  • Discrete polymorphisms
  • Frequencies of types in the population
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12
Q

What are the components of the “classical” school of variation?

A
  • Low levels of genetic variation in natural populations
  • “Wild type” is favored, mutants are eliminated
  • “Purifying” selection
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13
Q

What are the components of the “balance” school of variation?

A
  • Genetic variation is common in natural populations
  • Maintained by balancing selection
  • Heterozygotes are favored, maintaining both alleles
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14
Q

Know how to calculate allele frequencies and genotype frequencies.

A

Allele freqeuncies - # of specific allele/over all alleles

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15
Q

What are VNTRs?

A

Variable number of tandem repeats, a location on the genome where a short nucleotide sequence is organized as a tandem repeat

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16
Q

How are VNTR genotypes calculates?

A

With n alleles, there are n(n+1)/2 genotypes

17
Q

What does DNA sequencing consist of?

A

It is the ultimate level of variation, looks at SNPs

18
Q

What are SNPs?

A

Single nucleotide polymorphisms?