lecture 20 - recombinant proteins Flashcards

1
Q

What are the main steps in the prokaryotic production of recombinant proteins?

A

Isolate gene of interest via PCR, clone into expression plasmid, transform plasmid into bacteria for expression, grow cells expressing protein of interest, isolate and purify the protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
2
Q

What is cDNA?

A

complementary DNA - DNA synthesised from a SSRNA template in a reaction catalysed by the enzyme reverse transcriptase.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
3
Q

Why is cDNA useful for recombinant protein production?

A

It contains no introns, so can be processed by prokaryotic cells

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
4
Q

Why is recombinant insulin produced by making the A and B chains separately?

A

Natural insulin is produced in the pancreas as a pre-protein that is processed by the golgi. This process cannot occur in bacterial cells so the chains must be made separately and joined later on to form functional insulin

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
5
Q

What gene is used in plasmids to form fusion proteins with Insulin A and B chains in recombinant insulin production?

A

The Lac Z gene

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
6
Q

What is a Lac Z/ insulin fusion protein?

A

A protein that contains either an A or B insulin subunit as well as protein coded for by the Iac Z. This is the prerequisite required to manufacture functioning insulin, and is made in E. coli prokaryotic hosts.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
7
Q

What bonds must form between the A and B chains to create active insulin?

A

Disulfide bonds

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
8
Q

What type of cells are usually used in the production of recombinant insulin?

A

Prokaryotic cells - usually E. coli.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
9
Q

What are the advantages of prokaryotic production of recombinant proteins?

A

Low cost, high yield, pathogen free

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
10
Q

What are the disadvantages of prokaryotic production of recombinant proteins?

A

Proteins often partially folded, unable to perform post-translational modifications

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
11
Q

What are the steps in eukaryotic production of recombinant proteins?

A

Isolate cDNA, clone into eukaryotic expression plasmid, transform plasmid into bacteria to replicate, transfect plasmid into eukaryotic cells, extract recombinant protein from cell media, purify protein

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
12
Q

What is the difference between transformation and transfection?

A

Transformation is the transfer of foreign DNA into a bacterial, plant or yeast cell, while transfection is the introduction of foreign DNA to a eukaryotic mammalian cell

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
13
Q

Why are eukaryotic cells useful for processing of recombinant proteins?

A

They have Endoplasmic Reticulum, golgi, etc. that allow for natural processing

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
14
Q

What are the advantages of mammalian/eukaryotic cell production of recombinant proteins, such as insulin?

A

Cells have organelles (e.g. ER and golgi) that will naturally process complex proteins. The proteins are also excreted from the cells, making for easier processing.

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
15
Q

What are the disadvantages of mammalian/eukaryotic cell production of recombinant proteins, such as insulin?

A

Expensive

How well did you know this?
1
Not at all
2
3
4
5
Perfectly
16
Q

Why must recombinant EPO (erythropoietin) be made using mammalian cells?

A

EPO is only active when post-translationally modified via glycosylation where carbohydrates are added to certain amino acids. This can only happen in mammalian cells

17
Q

What mammalian cells are used in recombinant EPO production?

A

Chinese Hamster Ovary (CHO) cells

18
Q

Why are whole animals sometimes used to produce recombinant proteins, rather than just cells?

A

Cells in culture cannot perform all post-translational modifications equally as well as in an animal

19
Q

What recombination method is typically used to produce anti-thrombin?

A

Whole animal recombination - protein produced in goat’s milk

20
Q

What is anti-thrombin important for physiologically?

A

Appropriate blood clotting

21
Q

Why must anti-thrombin be produced in whole animals?

A

the protein must be post-translationally modified to function - there must be gamma-carboxylation of glutamate residues, which can only happen in live animal cells.

22
Q

How is anti-thrombin produced only in mammary glands of goats, and not other cell types?

A

The promotor region before the human AT gene is milk-specific, so will only respond to transcription factors/hormonal signals involved in lactation.

23
Q

What is reverse transcriptase?

A

A DNA polymerase enzyme that transcribes ssRNA into DNA?

24
Q

what do restriction enzymes cut?

A

double stranded DNA