Lecture 19- Bacterial Metabolism, Growth, & Metabolism Flashcards

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1
Q

C H O N& P make up how much by mass % in the body?

A

97%

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2
Q

What do bacteria need to make organic molecules, and what molecules do they use these organic molecules for?

A

Bacteria need C source & energy source to make macromolecules such as

  • Proteins
  • Carbohydrates
  • Nucleic acids
  • Lipids
  • comples such as glycolipids
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3
Q

Give examples of supramolecular structures present in bacteria

A
  • Cell Wall
  • Ribosome
  • Cell membrane
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4
Q

What is one thing all Autrotrophs have in common?

A

Their C source is inorganic CO₂

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5
Q

What are Photoautotrophs and give examples of some and how they react

A

use light to fix CO2

  • Cyanobacteria containing plant-type chlorophyll use water and CO2 TO MAKE (CH₂O)n & O2
  • certain protists such as algae
    Others (green Sulfur bacteria, purple bacteria) contain bacteriochlorophyll (photosystem I)- use CO2 & H₂S to make (CH₂O)n & S (live in anaerobic conditions such as muddy marsh bottom)
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6
Q

What are Chemoautotrophs and give examples

A
  • They are microorganisms that use Inorganic CO₂ as a C source and get energy by oxidizing inorganic compounds (H₂S S H₂ NH₃ nitrite)
  • example reaction is CO₂ + H₂O+H₂S+O2–> (CH₂O)n +H₂SO₄
  • They are bacteria (mostly archaea)n that live in extreme environments such as deep sea vents
  • examples are halophiles,Methanogens, Sulfur reducers , and SolfOslo is
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7
Q

What is one thing all heterotrophs have in common?

A

C source is organic

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8
Q

What are photoheterotrophs and give examples

A

mircroorganisms that use organic molecules as C source & derive energy from light (proteorhodopsin)

Examples include prokaryotes such as Rhodobacter, Chloroflexus

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9
Q

Are all plants autotrophs?

A

no, some are heterotrophs

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10
Q

What are chemoheterotrophs and give examples

A

Organisms that derive energy from organic molecules (such as glucose) and their C source is organic

examples include:

  • many prokaryotes such as Clostridium
  • protistists
  • fungi
  • animals & some plants
  • disease causing bacteria
  • Saprotrophs- environmental - decompose rotten food
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11
Q

Which type of organisms may be either free living or symbiotic & describe the 3 types of symbiotic

A

heterotrophs can be either symbiotic or free living

  • Mutualist- both help each other examples include bacteria in cows stomach that produce cellulase & N fixing bacteria in root nodules )
  • Commensalist- one gets help from the other- there are no true commensalists, they are only opportunitistic ones. Some of them modify environment to suit their needs such as E coli
  • Parasite- one takes help & harms host
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12
Q

What type of bacteria is E coli (free living, mutualism,etc?

A

Commensals- lives in small intestine

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13
Q

What do Bacteria need N for, and how do they obtain it?

A

for amino acids & nucleotides

most obtain from sorroundings along with other nutrients (rate limiting)

Some called nitrogen fixing can utilize N₂ & convert organic N forms

  • Symbiotic Rhizobia (bacteria in legume root nodules)
  • Non symbiotic bacteria Azotobacter, Clostridium
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14
Q

Explain mechanism of how N fixing bacteria fix N₂

A
  • Nitrogenase (a metalloprotein complex) catalyze reduction of N₂ to NH₃ by ferrodoxin & ATP

Active nitrogenase is formed form 2 polypeptide chains

  • FeMo-protein (dinitrogenase)
  • Fe-protein (dinitrogenase reductase)
  • 2 Fe-Mo cofactors also required
  • ​N₂ + 8H+ 8é+16ATP –> 2NH₃ + H₂ + 16ADP + 16Pi (highly energy consuming)
  • NH₃ can be assimilated by glutamine synthase catalysing NH₃ + Glutamate–> Glutamine or NH₃ can be converted to nitrite–> nitrate - can be used to make other molecules such as amino acids
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15
Q

How do Aerobic bacteria respire?

A

breakdown organic molecules with oxygen as an acceptor of é’s (Terminal electron acceptor, TEA)

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16
Q

What are the 2 ways that anaerobic bacteria respire?

A

Some use terminal electron acceptors (other than oxygen)

others take part in fermentation, without net transfer of é to a TEA

17
Q

What are obligate aerobes, facultative anaerobes, and obligate anaerobes?

A

Obligate aerobes- use only O₂ for respiration

Facultative anaerobes- use O₂ when present, fermentation (no TEA) if not present

Obligate anaerobes- poisoned by O₂ - some exclusive fermentation some use (nitrate, sulfate) as é acceptors (TEA)

18
Q

How many chromosomal DNA base pairs do Mycoplasma & E.coli have?

A

mycoplasma very small 500kb ≈500 proteins

E.coli average 4000kb ≈4000 proteins

genomes my include bacteriophage DNA that may code for important function

19
Q

What is the correlation between genome size and ability to make compounds, and which automated is used to identify different bacteria based on biochemical method

A

Direct correlation (more genes, can make more different compounds)

VITEK2 identify bacteria of medical importance based on biochemical method of identification (many compounds)

20
Q

How to bacteria divide, and what is the order that bacterial cells replicate dna, division and elongate cells?

A

​Binary fission

  1. cell elongation
  2. DNA replication
  3. cell division
21
Q

How do rod shaped bacteria grow and divide>

A

Bacilli bacteria grow at multiple sites, but divide in 1 plane (length)

22
Q

How do spherical bacterial cells grow and divide, and how does it affect how they look under microscope?

A

cocci grow near the site of division (septum or cross wall)

cocci may divide in any of several planes- resulting in different geometries of the daughter cells

  • if they divide in 1 plane they will form pairs or chains of cells (Streptococci)
  • If they divide in 2 planes it will make square of one-cell-deep packet of cells (Micrococcus)
  • if they divide in 3 planes it will. Are cubes (Sarcina)
  • if they divide irregularly it will make grape clusters (Staphylococci)
23
Q

What nutrients do bacteria need to grow, and what are the factors that affect it?

A

​​​​C N P trace elements like S Mg2+ Fe2+ Zn2

Temp,nutritional content, PH

24
Q

What are the 4 growth phases?

A
  • Lag- slow growth as bacteria adapt
  • Exponential/Log phase- exponential growth, doubled in minutes
  • Stationary phase- more competition, less nutrients growth stops
  • Death Phase- toxic waste products accumulate food depleted bacteria die