lect 6- bact. genome replication, expression and reg 2 Flashcards

1
Q

define global regulation

A

regulatory systems that affect many genes and pathways simultaneously

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2
Q

define regulon

A

genes or operons controlled by common regulatory protein

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3
Q

define modulon

A

operon network under control of common global regulatory protein but individual operons are controlled separately by their own regulators

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4
Q

define activator

A

enhances transcription needed

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5
Q

define repressor

A

inhibits transcription unless needed

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6
Q

what are the 2 proteins involved in 2 component regulatory system

A

sensory kinase and response-regulator protein

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7
Q

define EnvZ

A

sensory kinase: autophosphorylates in high osmolarity

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8
Q

define OmpR

A

response regulator: phosphorlyated and regulates transcription

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9
Q

what does sigma factor 70 do

A

transcribes genes that are needed during exponential growth

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10
Q

what does CheY do

A

governs rotation of flagella

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11
Q

is CheA.CheW active/phosphorylated when attractant concentration is high or low

A

when it is high

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12
Q

what does LuxR do

A

stimulates transcription of the genes for AHL synthase (luxe) and proteins needed for light production

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13
Q

define auxotrophic mutant

A

unable to make an essential macromolecule such as an aa or nucleotide

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14
Q

what corrects errors in DNA/does proofreading

A

DNA polymerase

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15
Q

what is photoreactivaiton direct repair used for

A

to directly rem air thymine dimers

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16
Q

define exogenote

A

DNA that is transferred to recipient

17
Q

define endogenote

A

genome of recipient

18
Q

define merozygote

A

recipient cell that is temporarily diploid as result of transfer process (HGT)

19
Q

what are the 3 types of recombination at the molecular level

A

homologous recombination, site specific recombination, transposition

20
Q

what carries out the process of homologous recombination

21
Q

what is site specific recombination mediated by

A

recombinase enzymes

22
Q

define composite transposons

A

transposable elements which contain extra genes

23
Q

what do F factors contain

A

info for formation of sex pilus

24
Q

what do the insertion sequences of F factors do

A

assist in plasmid integration

25
describe donor HFr cell
has F factor ingrates into its chromosome
26
define bacterial transformation
uptake of naked DNA by competent cell followed by incorporation of DNA into recipient cell's genome
27
describe the components of DNA uptake in bacterial transformation
PilQ aids in movement across outer membrane. PilE moves DNA across periplasm and peptidoglycan. ComE is DNA binding protein. N is nuclease that degrades one strand. ComA forms transmembrane channel
28
when does specialized transduction occur
when prophage is incorrectly excised