lect 6- bact. genome replication, expression and reg 2 Flashcards

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1
Q

define global regulation

A

regulatory systems that affect many genes and pathways simultaneously

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2
Q

define regulon

A

genes or operons controlled by common regulatory protein

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3
Q

define modulon

A

operon network under control of common global regulatory protein but individual operons are controlled separately by their own regulators

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4
Q

define activator

A

enhances transcription needed

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5
Q

define repressor

A

inhibits transcription unless needed

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6
Q

what are the 2 proteins involved in 2 component regulatory system

A

sensory kinase and response-regulator protein

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7
Q

define EnvZ

A

sensory kinase: autophosphorylates in high osmolarity

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8
Q

define OmpR

A

response regulator: phosphorlyated and regulates transcription

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9
Q

what does sigma factor 70 do

A

transcribes genes that are needed during exponential growth

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10
Q

what does CheY do

A

governs rotation of flagella

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11
Q

is CheA.CheW active/phosphorylated when attractant concentration is high or low

A

when it is high

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12
Q

what does LuxR do

A

stimulates transcription of the genes for AHL synthase (luxe) and proteins needed for light production

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13
Q

define auxotrophic mutant

A

unable to make an essential macromolecule such as an aa or nucleotide

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14
Q

what corrects errors in DNA/does proofreading

A

DNA polymerase

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15
Q

what is photoreactivaiton direct repair used for

A

to directly rem air thymine dimers

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16
Q

define exogenote

A

DNA that is transferred to recipient

17
Q

define endogenote

A

genome of recipient

18
Q

define merozygote

A

recipient cell that is temporarily diploid as result of transfer process (HGT)

19
Q

what are the 3 types of recombination at the molecular level

A

homologous recombination, site specific recombination, transposition

20
Q

what carries out the process of homologous recombination

A

RecA

21
Q

what is site specific recombination mediated by

A

recombinase enzymes

22
Q

define composite transposons

A

transposable elements which contain extra genes

23
Q

what do F factors contain

A

info for formation of sex pilus

24
Q

what do the insertion sequences of F factors do

A

assist in plasmid integration

25
Q

describe donor HFr cell

A

has F factor ingrates into its chromosome

26
Q

define bacterial transformation

A

uptake of naked DNA by competent cell followed by incorporation of DNA into recipient cell’s genome

27
Q

describe the components of DNA uptake in bacterial transformation

A

PilQ aids in movement across outer membrane. PilE moves DNA across periplasm and peptidoglycan. ComE is DNA binding protein. N is nuclease that degrades one strand. ComA forms transmembrane channel

28
Q

when does specialized transduction occur

A

when prophage is incorrectly excised