Kaplan Exam #1 Flashcards
how are peptides formed?
amino group of one AA attacks the carboxyl group of another
what helps to form protein primary, secondary, tertiary, and quarternary structure?
primary: peptide bonds
secondary: H-bonds
tertiary: R groups
quarternary: noncovalent bonds, acid/base
what amino acid is not optically active?
glycine
what is a nitrile group?
N triple bonded to C
what makes an electrophile better?
attaching an EWG to it
what is the difference between a Grignard reagant and hydrolysis?
Grignard reagant makes new C-C bonds
hydrolysis makes a carboxylic acid
what is the first step when conducting a ring closure?
identify/number the carbons
how does index of refraction relate to speed of light?
as index of refraction increases, speed of the light decreases
explain all of the concepts of myopia
nearsightedness
can see near but not far
light projects before the retina
material with the ____ index of refraction will allow light to travel through it at a faster speed
lower
is a converging lens convex or concave lens?
convex
to fix farsightedness, what type of glasses do you need?
converging lens, convex lens
any real image formed by a converging lens is _____
inverted
an image projected on the retina is _______
inverted and reduced
must be reduced because the retina is so small
anomers differ only in the _____
absolute configuration of the anomeric carbon
in alpha D-glucose, where does the anomeric OH point?
down
in beta D-glucose, where does the anomeric OH point?
up
a reducing sugar contains _____
a hemiacetal functional group
what is a reducing sugar
it is any sugar that is capable of acting as a reducing agent
pyranose vs. furanose ring
pyranose (6 members, 5 C and 1 O)
furanose (6 members, 4 C and 1 O)
what is mass percent composition referring to?
it is only referring to the one compound of the product (maybe unless otherwise specified)
what is a thiol group?
-SH
when two cysteine molecules interact they form _____
cystine, disulfide bridge
acyl halide
has a carbonyl, an R group, and a halogen
Quaternary structure exists when ____
multiple polypeptides interact to form a single protein with multiple subunits.
how are polysaccharides held together?
glycosidic bonds
atomic # + neutrons = _____
atomic mass
enthalpy is a ____ function
state
catalysts work by lowering the ______ but they don’t mess with ____
activation energy
enthalpy or free energy of a reaction
the slowest step of a reaction is the _____ step
rate determining step
when can we derive the rate law directly from the mechanism?
when it has been broken down into a series of elementary reactions and we know the slowest step
a second order reaction involves the interaction of how many molecules?
2
free energy/potential energy is represented by what?
deltaG
what does a spontaneous reaction tell us about Keq?
it is >1
from a free energy diagram, can we say anything about the potential energy of individual reactants?
no, only about all of the reactants together
oftentimes, what is the oxidation number of N?
-3
when a beam is balanced with no angular acceleration, the net ___ is 0
torque
acids that have multiple protons to donate are beneficial as buffers because?
they can act as buffers over several pH ranges
what part of a protein do hydrophobic amino acids prefer in water?
interior
what can enzymes do to the stereochemistry of a molecule when they hold the molecule in their active site?
retain it, invert it, racemize it
what are the intermolecular forces in valine mixture?
H-bond, dipole dipole and london dispersion
what are the intermolecular forces in valine mixture?
H-bond, dipole dipole and london dispersion
is silica polar or nonpolar?
polar
in thin layer chromatography with a polar stationary phase, will nonpolar or polar substance travel further?
nonpolar
what is average body temperature in celsius?
37 degrees C
1 picometer (pm) is how many meters
10^12 pm is 1 meter
how is an indicator chosen?
chosen as the one that changes color in the pH range around the equivalence point (or closest to it)
how is an indicator chosen?
chosen as the one that changes color in the pH range around the equivalence point (or closest to it)
would DNA or RNA be altered by purine definiciency?
both