Glycolysis Flashcards

1
Q

Another term for glycolysis?

A

Embden-Meyerhof-Parnas Pathway

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2
Q

What are the two stages and what steps do they span?

A

Energy investment stage (Steps 1-5)
Energy recovery stage (Steps 6-10)

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3
Q

Overall rxn and net ΔG?

A

glucose + 2 NAD+ + 2 ADP + 2 Pi → 2 pyruvate + 2 NADH + 2 ATP + 2 H2O + 4H+
ΔG = -85 kJ/mol

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4
Q

Can metabolites escape the pathway?

A

No due to lack of transporters

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5
Q

In the synthesis of pyruvate, how do the following types treat pyruvate?
1. aerobic
2. hypoxic
3. hypoxic/anaerobic

A

aerobic: proceeds to TCA cycle (as acetyl) and oxidative phosphorylation
hypoxic: lactic acid fermentation
hypoxic/anaerobic: ethanol fermentation

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6
Q

What is bi-bi mechanism?

A

2 substrates produce 2 products

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7
Q

In step 1 of glycolysis, cofactor Mg2+ is needed. Why?

A

ATP will inhibit hexokinase instead of attacking D-glucose

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8
Q

Enzyme, substrate, and product of step 1?

A

hexokinase, glucose to glucose-6-phosphate (G6P) coupled with ATP to ADP + Pi

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9
Q

Enzyme, substrate, and product of step 2?

A

phosphoglucose isomerase, G6P to fructose-6-phosphate (F6P)

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10
Q

Enzyme, substrate, and product of step 3?

A

phosphofructosekinase-1 (PFK-1), F6P to fructose-1,6-biphosphate (FBP) coupled with ATP to ADP + Pi

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11
Q

Enzyme, substrate, and product of step 4?

A

fructose-1,6-biphosphate aldolase, FBP to Dihydroxyacetone phosphate (DHAP) + Glyceraldehyde-3-phosphate (G3P)

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12
Q

Enzyme, substrate, and product of step 5?

A

triosephosphate isomerase (TIM), DHAP to G3P

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13
Q

Enzyme, substrate, and product of step 6?

A

Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), G3P to 1,3-biphosphoglycerate (1,3-BPG) coupled with NAD+ + Pi to NADH + H+

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14
Q

Enzyme, substrate, and product of step 7?

A

phosphoglycerate kinase (PGK), 1,3-BPG to 3-phosphoglycerate (3PG) coupled with ADP to ATP

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15
Q

Enzyme, substrate, and product of step 8?

A

Phosphoglycerate mutase, 3PG to 2-phosphoglycerate (2PG)

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16
Q

Enzyme, substrate, and product of step 9?

A

Enolase, 2PG to phosphoenol pyruvate (PEP)

17
Q

Enzyme, substrate, and product of step 10?

A

Pyruvate Kinase, PEP to pyruvate (enol) and eventually to pyruvate (keto) coupled with ADP + H+ to ATP

18
Q

In step 2 of glycolysis, why do we need to isomerize G6P to F6P?

A

Only F6P can yield 2 3C products. G6P yields 1 4C and 1 2C product.

19
Q

Why is step 3 of glycolysis also known as the “first committed step”?

A

allosteric enhancers and inhibitors are present to enhance or inhibit structure of enzyme

20
Q

Why does step 4 of glycolysis ensure the forward reaction to proceed?

A

fast removal of products from active site prevents reverse reaction. Very positive ΔG.

21
Q

In step 5 of glycolysis, a ___________ is created to convert DHAP to G3P

A

enediol intermediate

22
Q

In step 6, to convert G3P to 1,3-BPG, _________ and ________ must occur

A

phosphorylation and oxidation

23
Q

Step 6 is the start of what stage?

A

Energy recovery stage

24
Q

Step 7 is coupled with what step?

25
Step 8 contains residues at at active site. What is/are this/these?
phospho-His and free His residues
26
What is the purpose of isomerization of 3PG to 2PG?
stability of anion products
27
Highly exergonic step of glycolysis that required the creation of other steps?
Step 9 is highly exergonic that is why step 7-8 is important for stability.
28
What is the final form of the product in step 10?
pyruvate keto form
29
Fates of the pyruvate molecule.
Ethanol fermentation Lactic acid fermentation TCA Cycle (as acetyl)
30
What pathway do the following autotrophs undergo? 1. Aerobes 2. Anaerobes
Aerobes : TCA Cycle as Anaerobes : fermentation