Glossary Flashcards
spontaneous generation
living organisms arise from non living matter
louis pasteur
microorganisms are carried in the air and the root of disease
Semmolweis
found doctors transferred invisible agent
lead to hand washing and sterilisation
germ theory
microorganisms cause some/all disease
selective toxicity
‘magic bullet’
molecule kills pathogens but doesn’t harm human cells
pathogen
organism that causes disease
pathogenicity
ability to cause disease
virulence
degree of pathogenicity
epidemology
study of determinants, occurance and spread of disease
non specific defenses
not directed at particular organisms
specific defenses
mediated by hosts immune system and directed at particular organisms
humoral
cell-mediated
phagocytosis
defence mechanism where bacteria and viruses are ingested by scavaging cells
neutrophils
phagocytes
contain antimicrobial compounds
macrophages
initate inflammatory response
antibacterial when active
complement proteins
complex of blood proteins produced in cascade
enhances phagocytosis
opsonins
antibodies and complement proteins that enhance phagocytosis by opsonisation
peptidoglycan
thick rigid layer composed of overlapping lattice of two sugars crosslinked by peptide bridges
tetrapide
always attached to NAM sugar in peptidoglycan
contains both D and L amino acids=weird
nucleoid
structure containing a single chromosome
DNA gyrase
packs DNA into cells via supercoiling
spores
endospores are dormant survival structures in G+ cells
capsules
determinants of virulence made from polysacchardide slime
pili
protein tubes in G- bacteria
have pilus and lectin components
virulence factors
influence ability to cause disease- promote colonisation and harm host
endotoxins and exotoxins
virulence factors that damage host
endotoxins are called LPS
adhesions
proteins in bacterial cell wall
allows intimate binding to host cells
invasins
proteins in bacterial cell wall that allow penetration of host cell
flagella
enable motility
IgG
stick antigens to phagocytes
A-B toxins
interfere with host cell function by ADP-ribosylaytion
teichoic acid
found in G+ cell wall
protozoans
unicellular eukaryotes
motile stage
trophozoite
active growing stage of parasite
sporozoite
motile infectious stage of parasite
DALY
disability adjusted life year
YLL
sum of years life lost due to premature mortality
YLD
years lost due to disability
NTDs
neglected tropical disease
endosymbiosis
process by which mitochondria and chloroplasts developed by engulfment
didinium
carnivorous protozoan
dictysostelium
the slime mould
the 3 Rs
reduce
refine
replace
phospholipid head group
choline
phosphate
glycerol
phosphoglycerides head groups
ethanolamine
serine
choline
sphingomyelin
18 carbon sphingosine molecule
50-60% lipid mass
beta barrel/sheets
multipath transmembrane protien
glycophorin a
single pathway alpha helical transmembrane protein
bacteriorhodopsin
multipathway alpha helical transmembrane protein
translocon
channel to insert poypeptide into ER lumen
chaperons
family of HSC70
set 62/63 complex
closely associated with translocon
binding on post translational translocation
n linked glycosylation
proteins glycocylated on specific argenine residues
COP1
coating covering vesicles moving to the ER
COPII
coating covering vesicles moving away from ER
vestibular tubular cluster
where vesicles from ER meet cis Golgi network
di acidic amino acids
ER exit signal
di hydrophobic
ER exit signal
KDEl sequence
recycling system component for ER ang Golgi complex
glycosylation
determines cellular location
sphingomyelin
phospholipid formed from precursor ceramide
glycolipids
formed from precursor ceramide
cermaide
composed of:
sphingocine
fatty acid
dynamic instability
microtubules continually grow and then shrink back rapidly
anoxeme
conserved in evolution
tetramer
rope like structure
occluding junctions
seal cells of epithelium
claudins and occludins
in tight junctions
anchoring junctons
mechanically attach cells to other cells or matrix
cadherins
cell-cell transmembrane proteins in adheres junctions and desmosomes
integrins
cell-matrix transmembrane proteins in focal adhesions and hemidesmosomes
plectin
anchoring proteins in hemidesmosomes
communicating junctions
mediate passage of chemical or electrical signals between interacting cells
connexins
form gap junctions
made from 6 connexon proteins
plasmodesmata
plants junction
leukaemia
links nucleus to human disease
CAG triplet disease
links nucleus to human disease
laminopathies
links nucleus to human diseases
spinal muscular atrophy
links nucleus to human diseases
fibrillar centre
site in nucleoulus for genes encoding RNA
dense fibrillar component
site of rRNA processing in the nucleolus
granular component
site of assembly of ribosomes subunits in nucleolus
PLM bodies
transcription regulation
cleavage bodies
formation of 3’ end of DNA
cajal bodies
synthesis of snRNP splicing factors
karyopherins
importins and exportins
having binding sites for FG repeats
ranGTP/ranGDP
ras-related nuclear protein
controls transport direction across nuclear pore complex
ranGAP
ran GTP-ase activating protein
in the cytoplasm
ranGEF
ran guanine nucleotide exchange factor
attached to chromatin
FG repeats
found on nuclear pore proteins
s-phase
period during which chromosome are replicated
m-phase
mitosis
sister chromatid cohesion
holds chromatids together
biochemical switches
ordered to ensure stages occur in the correct order
checkpoints
ensure later events do not occur until previous stages are satisfactpry
conditional lethal mutants
inactivate genes without killing cell
catalytic subunit
protein kinase CDK
present at constant level through cell cycle
regulatory subunit
cyclins not at constant level in cell cycle
GI/S cyclins
activate cdks in late G1
called ‘start’
s-phase cyclins
interact with cdks just after start
m-phase cyclins
activate cdks driving entry to mitosis
CAK enzyme
phosphorylates serine or threonine in t-loop of CDK
Wee 1 protein kinase
phosphorylates CDK1
Cdc25 phosphoprotein phosphatase
removes phosphates to relieve inhibition
p27 CKI
inactivates CDK-cyclin complexes
CKI
CDK-inhibitor proteins
APC/C
ubiquitin ligase that intiates degradation by proteosome
lys48
joins ubiquitin ligase chains
Cdc20
activates APC/C mid mitosis
Cdh1
activates APC/C in ealry G1
securin
ubiquitin ligase
separase
protease that cleaves cohesion
Sld2 and Sld3
S-CDK phosphorylates these
to facilitate assembly of CMG complex
CMG complex
replicative helicasee
DDK
protein kinase
required to gully activate CMG complex
M-CDK
phosphorylates condensin subunits for chromosome condensation
post synaptic density
PSD
connecting membrane contains a large amount of protein
lamellipodia
flattened at tip into a thin fan shaped sheet
filopodia
very many spikes radiating forward
acetylcholinesterase
ach molcules hydrolysed
myasthenia gravia
lack of functional ach receptors
–> no action potentials
protoplasmic
astrocytes in grey matter
fibrous
astrocytes in white matter
MHC1 and MHC2
produces by microglia
antigen presenting cells to t cells
mesaxon
on axon
processes wrapped around axon in myelination
differentiation
process by which cells undergo overtly specialised cell type
specification
if you can isolate cells and tissues and they still form what they were meant ot
induction
process by which one region interacts with a second region to influence seond region
determination
progressive restriction in developmental potential of different cell types
competence
cells may be competent to receive signals only for a short time
regulative developemt
each blastomere capable of producing single embryos
mosaic development
blastomeres incomplete and development is arrested
assymetric inheritance
uneven distribution in cell separation
morphogen
signalling molecule acts directly on cells to produce specific response
lateral inhibition
act as signalling ventres for further patterning
notch signalling
transient asymmetry is enough
ascidians
models for development
urochordates
eph/ephrin
niche that is specialised microenvornment in intestinal crypt
beta-catenin
multi functional and adhesion is wnt signalling